Co-expression analysis

Gene ID HVSMEm0009E18r2_at
Gene name
Homology with ArabidopsisSimilar to At3g59670: unknown protein (HF=7e-1)
Module size 14 genes
NF 0.35
%ile 46.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.91HVSMEm0009E18r2_atHVSMEm0009E18r2--7e-1At3g59670unknown proteinO.I.H.G.S.X.
0.5066.90.93Contig24198_atContig24198--9e-2At2g19510LBD8 (LOB DOMAIN-CONTAINING PROTEIN 8)O.I.H.G.S.X.
0.4661.00.93Contig11462_atContig11462--8e-5At5g41770crooked neck protein, putative / cell cycle protein, putativeO.I.H.G.S.X.
0.4458.90.93Contig14003_atContig14003--4e-82At5g14040mitochondrial phosphate transporterO.I.H.G.S.X.
0.4458.90.94HV_CEa0008J10r2_atHV_CEa0008J10r2--4e+0At3g61310DNA-binding family proteinO.I.H.G.S.X.
0.4458.90.94Contig6399_atContig6399--5e-9At3g07810heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeO.I.H.G.S.X.
0.3849.50.94HVSMEm0003A13r2_atHVSMEm0003A13r2--1e+0At5g63500unknown proteinO.I.H.G.S.X.
0.3443.60.94Contig25106_atContig25106--4e+0At5g64990AtRABH1a (Arabidopsis Rab GTPase homolog H1a)O.I.H.G.S.X.
0.3342.60.94Contig20268_atContig20268--4e-1At5g12140ATCYS1 (A. thaliana cystatin-1)O.I.H.G.S.X.
0.3037.00.93Contig19799_atContig19799--2e-2At1g69430unknown proteinO.I.H.G.S.X.
0.3037.00.95HV_CEa0008P09r2_s_atHV_CEa0008P09r2--1e+0At5g35520MIS12 (MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE)O.I.H.G.S.X.
0.2427.20.94HU08L13u_atHU08L13u--5e+0At5g61280remorin family proteinO.I.H.G.S.X.
0.1919.60.92Contig15909_atContig15909--4e+0At5g39920-O.I.H.G.S.X.
0.1919.60.94Contig22623_atContig22623--5e-3At5g20400oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.496.6GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.096.0GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.595.1GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.394.6GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.194.1GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.993.4GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.893.1GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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