Co-expression analysis

Gene ID	HVSMEm0007D17r2_at
Gene name
Homology with Arabidopsis	Similar to At5g59050: unknown protein (HF=5e+0)
Module size	6 genes
NF	0.13
%ile	16.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	87.1	0.92	HVSMEm0007D17r2_at	HVSMEm0007D17r2	-	-	5e+0	At5g59050	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.92	Contig7564_at	Contig7564	-	-	4e-5	At2g32080	PUR ALPHA-1	O.I.	H.G.	S.X.	Please select
0.09	7.4	0.93	HY07F05u_x_at	HY07F05u	-	-	9e+0	At4g26288	-	O.I.	H.G.	S.X.	Please select
0.09	7.4	0.92	Contig17061_at	Contig17061	-	-	2e+0	At5g27940	WPP3 (WPP domain protein 3)	O.I.	H.G.	S.X.	Please select
0.08	6.5	0.92	Contig25746_at	Contig25746	-	-	4e-1	At3g59620	-	O.I.	H.G.	S.X.	Please select
0.08	6.5	0.92	AF016328_at	AF016328	-	-	7e-2	At1g75050	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.0	99.7	GSM146358	Golden Promise Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
15.3	99.6	GSM146364	Maythorpe Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
8.6	98.8	GSM146361	Golden Promise Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.5	97.6	GSM146367	Maythorpe Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.1	96.2	GSM146362	Golden Promise Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.4	94.8	GSM146368	Maythorpe Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.3	94.6	GSM146363	Maythorpe Root Control, biological rep1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.6	92.3	GSM146357	Golden Promise Root Control, biological rep1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.4	91.4	GSM146366	Maythorpe Root Salt, biological rep 1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.3	90.9	GSM146359	Golden Promise Root Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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