Co-expression analysis

Gene ID HVSMEl0010I15r2_x_at
Gene name
Homology with ArabidopsisSimilar to At5g60650: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.06
%ile 7.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.86HVSMEl0010I15r2_x_atHVSMEl0010I15r2--3e+0At5g60650unknown proteinO.I.H.G.S.X. (SUCROSE SYNTHASE 1)O.I.H.G.S.X. family proteinO.I.H.G.S.X. (UV REPAIR DEFECTIVE 3)O.I.H.G.S.X. proteinO.I.H.G.S.X. antigen-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.799.8GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
24.499.8GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
17.899.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.697.7GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.696.8GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
3.394.6GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
3.194.1GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.093.8GSM688988 h salt stressed replicate 1GSE3097Barley1 salinity stress studyLink to GEO
2.993.4GSM161220cold treatment rep2GSE6993Barley low temperature stressLink to GEO
2.993.4GSM261025ABA-Early-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.31317.1.S1_at, orthologous to the query gene, HVSMEl0010I15r2_x_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5779.2TaAffx.31317.1.S1_atAt5g60650--2e-2At4g31270transcription factorO.I.H.G.S.X.
0.7489.4Ta.13544.1.S1_a_atAt5g60650--8e-3At5g21430DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.6786.3Ta.1147.1.A1_atAt5g60650--3e+0At5g55720pectate lyase family proteinO.I.H.G.S.X.
0.6483.6Ta.1147.1.A1_x_atAt5g60650--3e+0At5g55720pectate lyase family proteinO.I.H.G.S.X.
0.5779.2Ta.23163.1.A1_atAt5g60650--3e-1At1g06770DRIP1 (DREB2A-INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.4869.0Ta.981.2.S1_atAt5g60650--5e+0At4g11760LCR17 (Low-molecular-weight cysteine-rich 17)O.I.H.G.S.X.
0.4058.4Ta.1147.2.S1_x_atAt5g60650--8e+0At4g18692unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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