Co-expression analysis

Gene ID	HVSMEl0009B19r2_s_at
Gene name
Homology with Arabidopsis	Similar to At5g47220: ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) (HF=1e+0)
Module size	6 genes
NF	0.36
%ile	48.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.85	HVSMEl0009B19r2_s_at	HVSMEl0009B19r2	-	-	1e+0	At5g47220	ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.97	HY02C19u_at	HY02C19u	-	-	5e+0	At4g15610	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.95	Contig12544_s_at	Contig12544	-	-	2e+1	At5g03100	F-box family protein	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.97	V00087.1_at	V00087.1	-	-	3e-1	At5g43525	-	O.I.	H.G.	S.X.	Please select
0.25	28.9	0.96	AF474072_CDS-4_at	AF474072_CDS-4	-	-	1e+0	At5g05810	ATL43	O.I.	H.G.	S.X.	Please select
0.17	16.9	0.96	Contig10097_at	Contig10097	-	-	4e-1	At3g16450	jacalin lectin family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.2	99.4	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
8.2	98.7	GSM282032	Malting_day1_Morex_rep1	GSE11200	Expression data from malting barley seeds
6.7	98.3	GSM238434	Embryo 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.3	98.1	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
6.2	98.0	GSM282033	Malting_day4_Harrington_rep4	GSE11200	Expression data from malting barley seeds
5.2	97.4	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
5.2	97.4	GSM282022	Malting_day4_Merit_rep4	GSE11200	Expression data from malting barley seeds
4.9	97.1	GSM238422	Endosperm 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.6	96.8	GSM282037	Malting_day1_Morex_rep2	GSE11200	Expression data from malting barley seeds
4.4	96.6	GSM282034	Malting_steeped_Morex_rep1	GSE11200	Expression data from malting barley seeds

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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