Co-expression analysis

Gene ID HVSMEl0002L06r2_at
Gene name
Homology with ArabidopsisSimilar to At4g19270: unknown protein (HF=3e-1)
Module size 27 genes
NF 0.56
%ile 77.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.70.93HVSMEl0002L06r2_atHVSMEl0002L06r2--3e-1At4g19270unknown proteinO.I.H.G.S.X.
0.8092.50.97HVSMEb0010L13r2_atHVSMEb0010L13r2--1e+0At5g19970unknown proteinO.I.H.G.S.X.
0.7991.40.95Contig2341_x_atContig2341--5e+0At4g14380unknown proteinO.I.H.G.S.X.
0.7790.80.97HU14M19u_s_atHU14M19u--3e+0At1g7406060S ribosomal protein L6 (RPL6B)O.I.H.G.S.X.
0.7689.80.96HS07P13u_s_atHS07P13u--5e-5At3g1678060S ribosomal protein L19 (RPL19B)O.I.H.G.S.X.
0.7187.10.97Contig15482_atContig15482--5e+0At2g07362unknown proteinO.I.H.G.S.X.
0.6885.10.97HA03D07u_s_atHA03D07u--1e-1At5g15530BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2)O.I.H.G.S.X.
0.6581.40.95HX11M07r_s_atHX11M07r--1e-1At2g42250CYP712A1O.I.H.G.S.X.
0.6581.40.95Contig3144_atContig3144--2e-4At1g11910aspartyl protease family proteinO.I.H.G.S.X.
0.6480.90.96HA27O10r_s_atHA27O10r--4e+0At1g50430DWF5 (DWARF 5)O.I.H.G.S.X.
0.6380.30.97HI05M04r_s_atHI05M04r--1e-23At2g3337060S ribosomal protein L23 (RPL23B)O.I.H.G.S.X.
0.6178.70.96Contig10700_atContig10700--2e+0At4g15990unknown proteinO.I.H.G.S.X.
0.5975.80.97Contig3541_s_atContig3541--2e-5At2g36390SBE2.1 (starch branching enzyme 2.1)O.I.H.G.S.X.
0.5774.90.98Contig10380_x_atContig10380--4e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.5674.30.97Contig6681_atContig6681--4e+0At5g63460SAP domain-containing proteinO.I.H.G.S.X.
0.5674.30.97Contig3972_atContig3972--7e-7At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.
0.5369.70.97Contig11081_atContig11081--1e-26At5g47640NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2)O.I.H.G.S.X.
0.5369.70.96Contig19629_atContig19629--1e-26At1g80900magnesium transporter CorA-like family protein (MGT1) (MRS2)O.I.H.G.S.X.
0.5369.70.97Contig15503_atContig15503--1e+0At3g04770RPSAb (40S ribosomal protein SA B)O.I.H.G.S.X.
0.5167.50.96EBem10_SQ004_B20_s_atEBem10_SQ004_B20--5e+0At4g30290XTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19)O.I.H.G.S.X.
0.4863.20.97Contig8701_atContig8701--3e-1At5g08290YLS8O.I.H.G.S.X.
0.4356.40.96Contig25214_atContig25214--1e+0At3g26935zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.4153.90.96Contig5972_atContig5972--1e-24At1g80460NHO1 (nonhost resistance to P. s. phaseolicola 1)O.I.H.G.S.X.
0.3849.50.96Contig3602_atContig3602--2e+0At4g22950AGL19 (AGAMOUS-LIKE 19)O.I.H.G.S.X.
0.3647.10.97HVSMEc0011O22r2_atHVSMEc0011O22r2--9e-2At3g17500F-box family proteinO.I.H.G.S.X.
0.3240.30.97HVSMEf0001O09r2_s_atHVSMEf0001O09r2--5e-1At4g15755C2 domain-containing proteinO.I.H.G.S.X.
0.3240.30.96Contig19871_atContig19871--4e+0At4g11060MTSSB (mitochondrially targeted single-stranded DNA binding protein)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.1GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.893.1GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
2.893.1GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
2.893.1GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.792.7GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
2.591.9GSM160744drought control rep2GSE6990Barley drought stressLink to GEO
2.591.9GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.591.9GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
2.591.9GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
2.591.9GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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