Co-expression analysis

Gene ID	HVSMEk0004C11r2_s_at
Gene name
Homology with Arabidopsis	Similar to At1g35365: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.05
%ile	6.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.75	HVSMEk0004C11r2_s_at	HVSMEk0004C11r2	-	-	2e+0	At1g35365	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.98	Contig4591_at	Contig4591	-	-	4e-2	At4g22890	PGR5-LIKE A	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.97	Contig9703_at	Contig9703	-	-	3e+0	At2g37200	integral membrane protein, putative	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.97	HZ49P22r_s_at	HZ49P22r	-	-	9e-1	At5g42825	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.93	HY04M24u_s_at	HY04M24u	-	-	1e-2	At1g54217	Expressed protein	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.92	Contig13507_at	Contig13507	-	-	2e+0	At4g24370	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
38.7	99.9	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
31.3	99.9	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
17.7	99.7	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
14.0	99.5	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
12.3	99.4	GSM238409	Pericarp 4DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
10.2	99.1	GSM238408	Pericarp 4DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
8.5	98.8	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
2.1	89.7	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
2.1	89.7	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.1	89.7	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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