Co-expression analysis

Gene ID HVSMEi0002I06r2_x_at
Gene name
Homology with ArabidopsisSimilar to At3g02220: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.64
%ile 85.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5774.90.97HVSMEi0002I06r2_x_atHVSMEi0002I06r2--3e+0At3g02220unknown proteinO.I.H.G.S.X.
0.6784.70.97Contig13538_atContig13538--2e+0At4g36430peroxidase, putativeO.I.H.G.S.X.
0.6784.70.97Contig6751_atContig6751--1e+0At3g04990-O.I.H.G.S.X.
0.6178.70.97Contig5893_atContig5893--1e-52At1g04170EIF2 GAMMAO.I.H.G.S.X.
0.5572.00.97Contig8220_atContig8220--6e-1At1g33040NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5)O.I.H.G.S.X.
0.4053.10.97Contig18044_atContig18044--1e+0At3g47070unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.898.3GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.897.8GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.697.7GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.796.9GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.596.7GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.296.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.196.2GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.595.1GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.993.4GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.792.7GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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