Co-expression analysis

Gene ID	HVSMEh0094M14f_s_at
Gene name
Homology with Arabidopsis	Similar to At4g21215: unknown protein (HF=2e-1)
Module size	9 genes
NF	0.58
%ile	80.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.72	HVSMEh0094M14f_s_at	HVSMEh0094M14f	-	-	2e-1	At4g21215	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.71	EBma08_SQ002_M18_at	EBma08_SQ002_M18	-	-	2e+0	At4g37830	cytochrome c oxidase-related	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.89	HVSMEn0009P16f2_at	HVSMEn0009P16f2	-	-	2e+0	At5g35475	-	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.91	Contig22536_at	Contig22536	-	-	4e+0	At1g47760	AGL102 (AGAMOUS-LIKE 102)	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.89	EBro02_SQ006_D14_s_at	EBro02_SQ006_D14	-	-	4e+0	At3g17580	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.89	HVSMEg0002K18r2_s_at	HVSMEg0002K18r2	-	-	6e-2	At3g25220	FKBP15-1	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.91	MitoContig10_x_at	MitoContig10	-	-	7e-1	At5g64060	anac103 (Arabidopsis NAC domain containing protein 103)	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.89	HVSMEn0008P15r2_at	HVSMEn0008P15r2	-	-	1e+0	At4g17310	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.89	ChlorContig17_s_at	ChlorContig17	-	-	0	Atcg01310	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.8	99.5	GSM238427	Endosperm 72 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
9.6	99.0	GSM238422	Endosperm 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
9.3	99.0	GSM419983	Seed_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
9.3	99.0	GSM440977	Control seed_Rep3	GSE17669	Gene expression in the barley spike during drought stress
8.4	98.8	GSM238420	Endosperm 0 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
8.3	98.8	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.4	98.5	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.3	98.1	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
5.0	97.2	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.7	96.9	GSM440978	Stressed seed_Rep1	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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