Co-expression analysis

Gene ID HVSMEg0016P19f_x_at
Gene name
Homology with ArabidopsisSimilar to At2g36261: unknown protein (HF=2e-2)
Module size 38 genes
NF 0.22
%ile 27.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.60.92HVSMEg0016P19f_x_atHVSMEg0016P19f--2e-2At2g36261unknown proteinO.I.H.G.S.X.
0.3747.90.94HVSMEm0004D09r2_atHVSMEm0004D09r2--3e-1At2g20500unknown proteinO.I.H.G.S.X.
0.3647.10.93Contig10018_atContig10018--3e-2At3g47300SELT (SELT-LIKE PROTEIN PRECURSOR)O.I.H.G.S.X.
0.3443.60.95Contig11034_atContig11034--9e-12At3g53180catalytic/ glutamate-ammonia ligaseO.I.H.G.S.X.
0.3342.60.95EBro02_SQ006_H18_s_atEBro02_SQ006_H18--2e+0At1g36510-O.I.H.G.S.X.
0.3138.60.95Contig8816_atContig8816--4e+0At5g14670ATARFA1B (ADP-ribosylation factor A1B)O.I.H.G.S.X.
0.3138.60.95HD08D07r_s_atHD08D07r--9e+0At5g53730harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.3037.00.94Contig12452_atContig12452--1e-1At3g28956catalytic/ nucleotide bindingO.I.H.G.S.X.
0.3037.00.95HD05C22r_atHD05C22r--1e+0At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)O.I.H.G.S.X.
0.3037.00.94Contig14066_atContig14066--1e-1At5g19151unknown proteinO.I.H.G.S.X.
0.2835.50.95Contig7648_atContig7648--6e-1At1g12250thylakoid lumenal protein-relatedO.I.H.G.S.X.
0.2630.40.93Contig7046_atContig7046--2e+0At2g21600ATRER1BO.I.H.G.S.X.
0.2630.40.94Contig19622_atContig19622--1e+0At3g60966protein binding / zinc ion bindingO.I.H.G.S.X.
0.2427.20.93Contig15111_atContig15111--2e-2At1g14150oxygen evolving enhancer 3 (PsbQ) family proteinO.I.H.G.S.X.
0.2326.10.94Contig12203_atContig12203--2e+0At5g09530hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2326.10.95Contig2937_s_atContig2937--9e-27At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)O.I.H.G.S.X.
0.2326.10.94HVSMEg0018F23r2_atHVSMEg0018F23r2--1e+0At5g15480zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2224.20.94Contig3707_atContig3707--1e-23At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinO.I.H.G.S.X.
0.2122.60.95Contig1549_s_atContig1549--2e-29At3g1095060S ribosomal protein L37a (RPL37aB)O.I.H.G.S.X.
0.2021.10.94Contig119_atContig119--1e-6At4g27230HTA2 (histone H2A)O.I.H.G.S.X.
0.2021.10.94Contig9154_atContig9154--7e-1At4g39340unknown proteinO.I.H.G.S.X.
0.2021.10.95rbah36k01_s_atrbah36k01--1e+0At3g04430anac049 (Arabidopsis NAC domain containing protein 49)O.I.H.G.S.X.
0.2021.10.95Contig10745_atContig10745--5e-1At5g43380TOPP6O.I.H.G.S.X.
0.1919.60.95Contig12495_atContig12495--4e-11At4g31790diphthine synthase, putative (DPH5)O.I.H.G.S.X.
0.1818.20.94Contig6926_atContig6926--2e-1At5g1552040S ribosomal protein S19 (RPS19B)O.I.H.G.S.X.
0.1716.90.95Contig10962_atContig10962--1e+0At4g27657unknown proteinO.I.H.G.S.X.
0.1716.90.95Contig8059_atContig8059--8e-18At1g08720EDR1 (ENHANCED DISEASE RESISTANCE 1)O.I.H.G.S.X.
0.1615.30.95Contig15062_atContig15062--1e-1At4g25440ZFWD1 (zinc finger WD40 repeat protein 1)O.I.H.G.S.X.
0.1514.10.96Contig10064_atContig10064--2e+0At2g12465LCR50 (Low-molecular-weight cysteine-rich 50)O.I.H.G.S.X.
0.1514.10.96HVSMEa0009I06r2_atHVSMEa0009I06r2--9e+0At5g59060unknown proteinO.I.H.G.S.X.
0.1514.10.95Contig3268_atContig3268--3e-30At3g2634020S proteasome beta subunit E, putativeO.I.H.G.S.X.
0.1514.10.94Contig7320_atContig7320--2e-1At1g26690emp24/gp25L/p24 family proteinO.I.H.G.S.X.
0.1514.10.95Contig9524_atContig9524--2e+0At1g31400meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.1210.40.96Contig9554_s_atContig9554--8e-8At4g01560MEE49 (maternal effect embryo arrest 49)O.I.H.G.S.X.
0.1210.40.94Contig10848_atContig10848--9e-9At3g43700ATBPM6 (BTB-POZ and MATH domain 6)O.I.H.G.S.X.
0.1210.40.95Contig13002_atContig13002--2e-10At1g45150unknown proteinO.I.H.G.S.X.
0.1210.40.94Contig10614_atContig10614--2e-13At5g13520peptidase M1 family proteinO.I.H.G.S.X.
0.119.40.96Contig26395_atContig26395--5e+0At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.797.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.696.8GSM146358Golden Promise Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.596.7GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.196.2GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.795.5GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.194.1GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
2.491.4GSM238419Endosperm 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.390.9GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.390.9GSM398255Martin_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.290.3GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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