Co-expression analysis

Gene ID HVSMEg0010K10r2_at
Gene name
Homology with ArabidopsisSimilar to At5g52200: unknown protein (HF=9e-1)
Module size 6 genes
NF 0.06
%ile 7.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.91HVSMEg0010K10r2_atHVSMEg0010K10r2--9e-1At5g52200unknown proteinO.I.H.G.S.X.
0.6784.70.92ChlorContig6_atChlorContig6--3e+0At1g05990calcium-binding protein, putativeO.I.H.G.S.X.
0.5572.00.92HVSMEi0017H19r2_s_atHVSMEi0017H19r2--2e+0At3g07890RabGAP/TBC domain-containing proteinO.I.H.G.S.X.
0.108.40.92HVSMEb0001J09r2_x_atHVSMEb0001J09r2--7e+0At5g45710RHA1 (ROOT HANDEDNESS 1)O.I.H.G.S.X.
0.043.40.91HV_CEa0002J17f2_x_atHV_CEa0002J17f2--3e+0At5g43480unknown proteinO.I.H.G.S.X.
0.021.80.90HS06P18u_atHS06P18u--5e-1At3g22630PBD1 (20S PROTEASOME BETA SUBUNIT D1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.9GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
6.498.1GSM372942genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.897.8GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
5.397.4GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
4.596.7GSM372979genotype: 11542 - pathogen isolates: 5874 - time: 8 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.895.7GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
3.394.6GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.394.6GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.194.1GSM372973genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.993.4GSM146376Maythorpe shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.222279.1.S1_x_at, orthologous to the query gene, HVSMEg0010K10r2_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8296.3PtpAffx.222279.1.S1_x_atAt5g52200hypothetical protein-1e-28Atcg00040-O.I.H.G.S.X.
0.5279.4PtpAffx.147335.1.A1_atAt5g52200hypothetical protein-2e-12At1g62390octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.4875.4PtpAffx.147311.1.A1_atAt5g52200hypothetical protein /// glutamate-gated kainate-type ion channel receptor subunit GluR5-2e-12At2g17265HSK (HOMOSERINE KINASE)O.I.H.G.S.X.
0.3863.7Ptp.5867.1.S1_atAt5g52200--1e-42At1g04940TIC20 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20)O.I.H.G.S.X.
0.3661.6Ptp.6435.1.S1_atAt5g52200hypothetical protein-5e-26At5g26880tRNA/rRNA methyltransferase (SpoU) family proteinO.I.H.G.S.X.
0.3559.7PtpAffx.114620.1.A1_atAt5g52200--9e+0Atcg01080-O.I.H.G.S.X.
0.2950.5PtpAffx.213727.1.S1_atAt5g52200hypothetical protein-8e-1At2g22320unknown proteinO.I.H.G.S.X.
0.2950.5PtpAffx.215363.1.S1_atAt5g52200hypothetical protein-3e+0At5g52340ATEXO70A2 (exocyst subunit EXO70 family protein A2)O.I.H.G.S.X.
0.2747.1PtpAffx.15017.2.A1_a_atAt5g52200hypothetical protein-3e-14At3g20320TGD2 (TRIGALACTOSYLDIACYLGLYCEROL2)O.I.H.G.S.X.
0.2238.3Ptp.1692.1.A1_s_atAt5g52200hypothetical protein-1e-5At5g26880tRNA/rRNA methyltransferase (SpoU) family proteinO.I.H.G.S.X.
0.1118.1PtpAffx.211252.1.S1_atAt5g52200hypothetical protein-2e-10At3g56330N2,N2-dimethylguanosine tRNA methyltransferase family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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