Co-expression analysis

Gene ID	HVSMEg0003O11r2_at
Gene name
Homology with Arabidopsis	Similar to At4g24015: zinc finger (RING-H2 type) protein-related (HF=2e-1)
Module size	6 genes
NF	0.06
%ile	7.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.77	HVSMEg0003O11r2_at	HVSMEg0003O11r2	-	-	2e-1	At4g24015	zinc finger (RING-H2 type) protein-related	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.93	rbaal21g04_s_at	rbaal21g04	-	-	6e+0	At3g43480	-	O.I.	H.G.	S.X.	Please select
0.13	11.6	0.94	Contig5401_at	Contig5401	-	-	1e-39	At1g03475	LIN2 (LESION INITIATION 2)	O.I.	H.G.	S.X.	Please select
0.05	4.1	0.91	Contig10599_at	Contig10599	-	-	5e-8	At4g28706	pfkB-type carbohydrate kinase family protein	O.I.	H.G.	S.X.	Please select
0.03	2.6	0.92	Contig21290_at	Contig21290	-	-	2e+0	At5g01910	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	2.6	0.92	Contig23795_at	Contig23795	-	-	1e+1	At5g49220	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	97.9	GSM398270	HS41-1_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.9	97.1	GSM398258	Martin_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.5	96.7	GSM398259	Martin_5d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.1	96.2	GSM398260	Martin_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.7	95.5	GSM398283	Moroc9-75_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.6	95.3	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.6	95.3	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.5	95.1	GSM419977	Palea_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
3.5	95.1	GSM440965	Control palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.3	94.6	GSM398272	HS41-1_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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