Co-expression analysis

Gene ID	HVSMEf0019H05r2_at
Gene name
Homology with Arabidopsis	Similar to At5g47050: protein binding / zinc ion binding (HF=6e+0)
Module size	6 genes
NF	0.13
%ile	16.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.0	0.92	HVSMEf0019H05r2_at	HVSMEf0019H05r2	-	-	6e+0	At5g47050	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.94	Contig9922_s_at	Contig9922	-	-	4e+0	At5g49050	-	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.94	Contig13552_at	Contig13552	-	-	7e-3	At1g15510	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.17	16.9	0.94	Contig12625_at	Contig12625	-	-	5e-11	At1g09440	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.05	4.1	0.92	Contig13765_at	Contig13765	-	-	5e-2	At3g07940	zinc finger and C2 domain protein, putative	O.I.	H.G.	S.X.	Please select
0.05	4.1	0.92	Contig15471_at	Contig15471	-	-	7e+0	At4g17310	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.0	97.2	GSM372986	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.0	97.2	GSM373009	genotype: 11542 - pathogen isolates: K1 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.9	97.1	GSM372982	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.5	96.7	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.5	96.7	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.3	96.4	GSM282026	Malting_day1_Legacy_rep4	GSE11200	Expression data from malting barley seeds
4.2	96.3	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.0	96.0	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.9	95.8	GSM146377	Maythorpe shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.8	95.7	GSM372983	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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