Co-expression analysis

Gene ID	HVSMEf0013J20f_at
Gene name
Homology with Arabidopsis	Similar to At4g01925: DC1 domain-containing protein (HF=3e+0)
Module size	10 genes
NF	0.24
%ile	29.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	80.9	0.90	HVSMEf0013J20f_at	HVSMEf0013J20f	-	-	3e+0	At4g01925	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.91	HVSMEh0088J12r2_at	HVSMEh0088J12r2	-	-	9e+0	At5g26890	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.92	Contig19817_s_at	Contig19817	-	-	5e+0	At5g49050	-	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.93	Contig15977_at	Contig15977	-	-	2e+1	At5g38435	SPH8 (S-PROTEIN HOMOLOGUE 8)	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.93	Contig16506_at	Contig16506	-	-	1e-13	At3g27020	YSL6 (YELLOW STRIPE LIKE 6)	O.I.	H.G.	S.X.	Please select
0.19	19.6	0.92	Contig8302_at	Contig8302	-	-	1e-5	At1g09090	ATRBOHB (respiratory burst oxidase homolog B)	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.91	HA10M05u_s_at	HA10M05u	-	-	2e-1	At4g04680	-	O.I.	H.G.	S.X.	Please select
0.15	14.1	0.93	Contig19820_at	Contig19820	-	-	3e+0	At5g67420	LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)	O.I.	H.G.	S.X.	Please select
0.12	10.4	0.92	HVSMEk0002P01f_x_at	HVSMEk0002P01f	-	-	4e+0	At5g60960	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.92	Contig16214_at	Contig16214	-	-	2e+0	At3g26790	FUS3 (FUSCA 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	98.1	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
5.2	97.4	GSM431573	pathogen isolates: Polymyxa betae - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
4.6	96.8	GSM160819	38% SWC rep1	GSE6990	Barley drought stress
4.5	96.7	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
4.4	96.6	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.0	96.0	GSM431568	pathogen isolates: Mock inoculated control - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.9	95.8	GSM261027	ABA-Late-rep1	GSE10328	ABA experiment
3.7	95.5	GSM431570	pathogen isolates: Mock inoculated control - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.7	95.5	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
3.7	95.5	GSM431569	pathogen isolates: Mock inoculated control - rep2	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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