Co-expression analysis

Gene ID	HVSMEf0010L07r2_at
Gene name
Homology with Arabidopsis	Similar to At5g08480: VQ motif-containing protein (HF=7e+0)
Module size	8 genes
NF	0.12
%ile	14.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	74.9	0.89	HVSMEf0010L07r2_at	HVSMEf0010L07r2	-	-	7e+0	At5g08480	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select
0.37	47.9	0.89	Contig10564_at	Contig10564	-	-	5e-1	At1g51090	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.89	Contig7157_at	Contig7157	-	-	2e-11	At2g24500	FZF	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.90	Contig411_at	Contig411	-	-	0	At5g19780	TUA5	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.90	Contig2595_at	Contig2595	Sec61 alpha subunit	-	2e-69	At1g29310	P-P-bond-hydrolysis-driven protein transmembrane transporter	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.93	Contig1820_at	Contig1820	-	-	8e-3	At2g15490	UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4)	O.I.	H.G.	S.X.	Please select
0.07	5.8	0.90	Contig2616_at	Contig2616	-	-	2e+0	At5g11990	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.90	Contig16086_at	Contig16086	-	-	6e-3	At4g39720	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.1	98.7	GSM238414	Endosperm 8DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.2	97.4	GSM419976	Palea_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
5.2	97.4	GSM440964	Control palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
5.1	97.3	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.4	96.6	GSM440978	Stressed seed_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.9	95.8	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.9	95.8	GSM431570	pathogen isolates: Mock inoculated control - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.9	95.8	GSM431550	pathogen isolates: Polymyxa graminis - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
3.8	95.7	GSM431571	pathogen isolates: Polymyxa betae - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.6	95.3	GSM431573	pathogen isolates: Polymyxa betae - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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