Co-expression analysis

Gene ID HVSMEf0008B14r2_s_at
Gene name
Homology with ArabidopsisSimilar to At1g28335: LCR31 (Low-molecular-weight cysteine-rich 31) (HF=2e-1)
Module size 9 genes
NF 0.29
%ile 37.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.70.91HVSMEf0008B14r2_s_atHVSMEf0008B14r2--2e-1At1g28335LCR31 (Low-molecular-weight cysteine-rich 31)O.I.H.G.S.X.
0.5066.90.94Contig9037_atContig9037--1e-1At3g42310unknown proteinO.I.H.G.S.X.
0.3849.50.94Contig16601_atContig16601--3e+0At2g40070-O.I.H.G.S.X.
0.3138.60.94Contig3899_atContig3899--6e-10At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)O.I.H.G.S.X.
0.2021.10.94Contig145_x_atContig145--4e-10At1g08880H2AXAO.I.H.G.S.X.
0.2021.10.92baak34e14_atbaak34e14--3e+0At2g32340-O.I.H.G.S.X.
0.2021.10.94Contig8795_atContig8795--6e-1At2g26500cytochrome b6f complex subunit (petM), putativeO.I.H.G.S.X.
0.1716.90.95Contig13294_atContig13294--6e+0At5g28463unknown proteinO.I.H.G.S.X.
0.1311.60.94Contig11136_atContig11136--4e-2At3g60910catalytic/ methyltransferaseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.697.7GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.597.6GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.796.9GSM372974genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.596.7GSM372997genotype: 11542 - pathogen isolates: K1 - time: 8 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.995.8GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.795.5GSM372992genotype: 11542 - pathogen isolates: K1 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.494.8GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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