Co-expression analysis

Gene ID	HVSMEf0004A21r2_at
Gene name
Homology with Arabidopsis	Similar to At2g14045: unknown protein (HF=2e-1)
Module size	6 genes
NF	0.60
%ile	82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.91	HVSMEf0004A21r2_at	HVSMEf0004A21r2	-	-	2e-1	At2g14045	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.93	Contig1411_s_at	Contig1411	-	-	6e-5	At4g15210	BAM5 (BETA-AMYLASE 5)	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.91	Contig6845_at	Contig6845	-	-	2e+0	At4g33350	chloroplast inner membrane import protein Tic22, putative	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.93	HVSMEc0011A22r2_at	HVSMEc0011A22r2	-	-	1e+0	At2g41920	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.93	HVSMEc0013C11r2_at	HVSMEc0013C11r2	-	-	7e-2	At2g05600	-	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.92	Contig22781_at	Contig22781	-	-	1e+1	At5g53895	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.3	99.7	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
15.6	99.6	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.7	99.0	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
6.4	98.1	GSM282041	Control_dryseed_Morex_rep2	GSE11200	Expression data from malting barley seeds
6.1	98.0	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.7	96.9	GSM261077	Albina e-16 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.1	96.2	GSM261078	Albina e-16 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.0	96.0	GSM261066	Xantha s-46 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.8	95.7	GSM160826	19% SWC rep3	GSE6990	Barley drought stress
3.7	95.5	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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