Co-expression analysis

Gene ID HVSMEf0003F23r2_at
Gene name
Homology with ArabidopsisSimilar to At5g09570: - (HF=9e-1)
Module size 6 genes
NF 0.49
%ile 68.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.87HVSMEf0003F23r2_atHVSMEf0003F23r2--9e-1At5g09570-O.I.H.G.S.X.
0.5066.90.84Contig4931_atContig4931--1e-22At1g75850VPS35B (VPS35 HOMOLOG B)O.I.H.G.S.X.
0.4458.90.88Contig9481_atContig9481--2e+0At5g60830AtbZIP70 (Arabidopsis thaliana basic leucine-zipper 70)O.I.H.G.S.X.
0.4053.10.88Contig6238_s_atContig6238--1e-7At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)O.I.H.G.S.X.
0.3342.60.87Contig6233_s_atContig6233--3e-8At5g08790ATAF2O.I.H.G.S.X.
0.2935.50.87Contig12297_atContig12297--1e+0At3g13190myosin heavy chain-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.396.4GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.895.7GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.595.1GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.394.6GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.893.1GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
2.792.7GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.692.3GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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