Co-expression analysis

Gene ID HVSMEc0011A22r2_at
Gene name
Homology with ArabidopsisSimilar to At2g41920: protein kinase family protein (HF=1e+0)
Module size 9 genes
NF 0.55
%ile 76.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7489.10.92HVSMEc0011A22r2_atHVSMEc0011A22r2--1e+0At2g41920protein kinase family proteinO.I.H.G.S.X.
0.7489.10.92HVSMEc0013C11r2_atHVSMEc0013C11r2--7e-2At2g05600-O.I.H.G.S.X.
0.6380.30.92HVSMEc0010O09r2_atHVSMEc0010O09r2--1e+0At5g28630glycine-rich proteinO.I.H.G.S.X.
0.6077.30.91HK05N20r_atHK05N20r--3e+0Atcg00790-O.I.H.G.S.X.
0.4661.00.92HVSMEf0004A21r2_atHVSMEf0004A21r2--2e-1At2g14045unknown proteinO.I.H.G.S.X.
0.4661.00.92Contig10750_atContig10750--1e-4At1g51600TIFY2AO.I.H.G.S.X.
0.4255.20.92Contig25750_atContig25750--4e+0At5g07880SNAP29O.I.H.G.S.X.
0.4053.10.92Contig22141_atContig22141--3e+0At3g07440unknown proteinO.I.H.G.S.X.
0.4053.10.93Contig15729_atContig15729--3e-2At3g11280myb family transcription factorO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.499.2GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
9.499.0GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.998.3GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
6.998.3GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.397.4GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.097.2GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.796.9GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.296.3GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.296.3GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
4.296.3GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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