Co-expression analysis

Gene ID	HVSMEc0009L17r2_at
Gene name
Homology with Arabidopsis	Similar to At1g04778: unknown protein (HF=3e+0)
Module size	6 genes
NF	0.13
%ile	16.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.80	HVSMEc0009L17r2_at	HVSMEc0009L17r2	-	-	3e+0	At1g04778	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.91	HW06A14u_at	HW06A14u	-	-	2e+1	At5g55710	-	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.93	HVSMEc0005D12r2_s_at	HVSMEc0005D12r2	-	-	8e-1	At5g08185	MIR162A (MICRORNA 162A)	O.I.	H.G.	S.X.	Please select
0.09	7.4	0.94	HT05K24u_at	HT05K24u	-	-	4e+0	At4g26520	fructose-bisphosphate aldolase, cytoplasmic	O.I.	H.G.	S.X.	Please select
0.09	7.4	0.94	HT07P24u_at	HT07P24u	-	-	4e+0	At3g49305	-	O.I.	H.G.	S.X.	Please select
0.03	2.6	0.95	S0000800072B12F1_at	S0000800072B12F1	-	-	9e+0	At1g07476	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.3	98.5	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
7.1	98.4	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.5	98.2	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
5.7	97.7	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
5.7	97.7	GSM398261	HS41-1_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.5	97.6	GSM238429	Embryo 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.7	96.9	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.3	96.4	GSM146362	Golden Promise Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.3	96.4	GSM238436	Embryo 48 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.2	96.3	GSM238434	Embryo 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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