Co-expression analysis

Gene ID	HVSMEb0014K09r2_s_at
Gene name
Homology with Arabidopsis	Similar to At4g21215: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.06
%ile	7.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	74.3	0.88	HVSMEb0014K09r2_s_at	HVSMEb0014K09r2	-	-	2e+0	At4g21215	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.89	HU13P05r_at	HU13P05r	-	-	1e+0	At3g61880	CYP78A9 (CYTOCHROME P450 78A9)	O.I.	H.G.	S.X.	Please select
0.12	10.4	0.90	Contig14861_at	Contig14861	-	-	5e-1	At2g45530	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.10	8.4	0.88	Contig16179_s_at	Contig16179	-	-	5e+0	At4g31700	RPS6 (RIBOSOMAL PROTEIN S6)	O.I.	H.G.	S.X.	Please select
0.09	7.4	0.89	HVSMEm0003G18r2_at	HVSMEm0003G18r2	-	-	9e-1	At1g09665	Toll-Interleukin-Resistance (TIR) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.90	Contig14570_at	Contig14570	aldehyde decarbonylase enzyme CER1;1-like	-	5e+0	At5g07100	WRKY26	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	94.6	GSM71148	OWB-R unstress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.3	94.6	GSM160815	drought control rep3	GSE6990	Barley drought stress
3.2	94.3	GSM261041	Dicktoo-deacclimation-rep3	GSE10329	Low temperature stress in cv. Dicktoo
3.0	93.8	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.9	93.4	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.9	93.4	GSM419983	Seed_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
2.9	93.4	GSM440977	Control seed_Rep3	GSE17669	Gene expression in the barley spike during drought stress
2.7	92.7	GSM238418	Endosperm 25DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
2.6	92.3	GSM160819	38% SWC rep1	GSE6990	Barley drought stress
2.5	91.9	GSM261032	Dicktoo control-rep3	GSE10329	Low temperature stress in cv. Dicktoo

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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