Co-expression analysis

Gene ID	HVSMEb0014H09r2_at
Gene name
Homology with Arabidopsis	Similar to At5g53486: unknown protein (HF=1e+1)
Module size	6 genes
NF	0.03
%ile	3.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.0	0.89	HVSMEb0014H09r2_at	HVSMEb0014H09r2	-	-	1e+1	At5g53486	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.87	AJ311603_at	AJ311603	-	-	2e+0	At4g17470	palmitoyl protein thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.85	EBan01_SQ005_L09_at	EBan01_SQ005_L09	-	-	8e+0	At2g38360	PRA1.B4 (PRENYLATED RAB ACCEPTOR 1.B4)	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.90	Contig21414_at	Contig21414	-	-	9e-2	At1g77020	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.90	Contig20056_at	Contig20056	-	-	1e+0	At1g67280	lactoylglutathione lyase, putative / glyoxalase I, putative	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.89	rbags12l21_at	rbags12l21	-	-	9e-1	At1g27300	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.7	99.9	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
20.0	99.7	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
13.4	99.4	GSM440978	Stressed seed_Rep1	GSE17669	Gene expression in the barley spike during drought stress
10.5	99.2	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
7.2	98.5	GSM238414	Endosperm 8DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.9	98.3	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.7	97.7	GSM238417	Endosperm 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
5.3	97.4	GSM261068	Albina f-17 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.0	97.2	GSM419982	Seed_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
5.0	97.2	GSM440976	Control seed_Rep2	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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