Co-expression analysis

Gene ID HVSMEb0009N20r2_at
Gene name
Homology with ArabidopsisSimilar to At3g50960: PLP3a (Phosducin-like protein 3 homolog) (HF=6e+0)
Module size 12 genes
NF 0.39
%ile 53.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6985.50.94HVSMEb0009N20r2_atHVSMEb0009N20r2--6e+0At3g50960PLP3a (Phosducin-like protein 3 homolog)O.I.H.G.S.X.
0.4458.90.96Contig1434_s_atContig1434--2e-1At5g58580ATL63 (ARABIDOPSIS TÓO.I.H.G.S.X.
0.4458.90.96Contig18744_atContig18744--2e+0At5g41630F-box family proteinO.I.H.G.S.X.
0.4255.20.95HU13K14u_atHU13K14u--4e-2At2g30530unknown proteinO.I.H.G.S.X.
0.4053.10.96Contig3976_atContig3976--5e+0At5g33330RNase H domain-containing proteinO.I.H.G.S.X.
0.4053.10.97Contig16455_atContig16455--1e-1At3g46880unknown proteinO.I.H.G.S.X.
0.3747.90.96Contig14264_atContig14264--2e+0At1g48780unknown proteinO.I.H.G.S.X.
0.3647.10.95Contig119_atContig119--1e-6At4g27230HTA2 (histone H2A)O.I.H.G.S.X.
0.3240.30.96Contig255_atContig255--4e+0At3g53670unknown proteinO.I.H.G.S.X.
0.3240.30.96Contig7911_atContig7911--2e-4At4g28400protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2935.50.96Contig8495_atContig8495--2e-5At2g24740SDG21 (SET DOMAIN GROUP 21)O.I.H.G.S.X.
0.1818.20.95HVSMEk0017M22r2_atHVSMEk0017M22r2--1e+0At2g34440AGL29 (AGAMOUS-LIKE 29)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.997.1GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.196.2GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.196.2GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.695.3GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.595.1GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.595.1GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM440973Stressed awn_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.394.6GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.394.6GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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