Co-expression analysis

Gene ID	HVSMEb0007D15r2_at
Gene name
Homology with Arabidopsis	Similar to At4g15120: VQ motif-containing protein (HF=2e-1)
Module size	6 genes
NF	0.06
%ile	7.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.87	HVSMEb0007D15r2_at	HVSMEb0007D15r2	-	-	2e-1	At4g15120	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.89	Contig17779_at	Contig17779	-	-	2e-2	At5g41680	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.07	5.8	0.89	Contig11507_at	Contig11507	-	-	7e-22	At5g19420	Ran GTPase binding / chromatin binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.05	4.1	0.89	Contig7242_at	Contig7242	-	-	1e-6	At1g49960	xanthine/uracil permease family protein	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.89	HA01F07u_at	HA01F07u	-	-	3e-38	At1g09200	histone H3	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.89	rbags25e03_at	rbags25e03	-	-	3e+0	At3g26070	plastid-lipid associated protein PAP / fibrillin family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.1	98.4	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.4	98.1	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.8	97.8	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.4	97.5	GSM261066	Xantha s-46 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.4	97.5	GSM261063	Xantha s-46 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.1	96.2	GSM261062	Xantha s-46 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.0	96.0	GSM261065	Xantha s-46 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.9	95.8	GSM261057	Xantha b-12 Cotrol rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.8	95.7	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.8	95.7	GSM372948	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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