Co-expression analysis

Gene ID HVSMEa0014P20r2_x_at
Gene name
Homology with ArabidopsisSimilar to At5g13790: AGL15 (AGAMOUS-LIKE 15) (HF=1e+1)
Module size 9 genes
NF 0.14
%ile 16.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.89HVSMEa0014P20r2_x_atHVSMEa0014P20r2--1e+1At5g13790AGL15 (AGAMOUS-LIKE 15)O.I.H.G.S.X.
0.2835.50.90HW06I23u_atHW06I23u--4e+0At5g63030glutaredoxin, putativeO.I.H.G.S.X.
0.2528.90.91HA10O08u_x_atHA10O08u--3e+1Atmg01170-O.I.H.G.S.X.
0.1514.10.92Contig8302_atContig8302--1e-5At1g09090ATRBOHB (respiratory burst oxidase homolog B)O.I.H.G.S.X.
0.108.40.93Contig16560_atContig16560--8e-2At1g69210unknown proteinO.I.H.G.S.X.
0.108.40.92Contig4745_s_atContig4745--2e+0At5g37520unknown proteinO.I.H.G.S.X.
0.097.40.92HVSMEc0002N01f2_s_atHVSMEc0002N01f2--1e+1At5g43245unknown proteinO.I.H.G.S.X.
0.054.10.93Contig1317_s_atContig1317--1e+0At5g17480APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)O.I.H.G.S.X.
0.043.40.92HVSMEa0019A17r2_atHVSMEa0019A17r2--9e-1At1g20620CAT3 (CATALASE 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.098.7GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.198.0GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.597.6GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
4.696.8GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.494.8GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.394.6GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seedsLink to GEO
3.093.8GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.093.8GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.893.1GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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