Co-expression analysis

Gene ID HVSMEa0008L11r2_at
Gene name
Homology with ArabidopsisSimilar to At3g50960: PLP3a (Phosducin-like protein 3 homolog) (HF=2e-1)
Module size 6 genes
NF 0.07
%ile 8.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.67HVSMEa0008L11r2_atHVSMEa0008L11r2--2e-1At3g50960PLP3a (Phosducin-like protein 3 homolog)O.I.H.G.S.X.
0.1210.40.90Contig6211_atContig6211--8e-9At1g04630MEE4 (maternal effect embryo arrest 4)O.I.H.G.S.X.
0.119.40.86Contig5810_s_atContig5810--5e-2At4g23410TET5 (TETRASPANIN5)O.I.H.G.S.X.
0.064.80.93Contig3810_atContig3810--3e-18At1g09350AtGolS3 (Arabidopsis thaliana galactinol synthase 3)O.I.H.G.S.X.
0.032.60.91HD07I22r_s_atHD07I22r--5e+0At4g21090adrenodoxin-like ferredoxin 1O.I.H.G.S.X.
0.021.80.79Contig191_s_atContig191--7e-6At2g33740CUTAO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.099.1GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
6.998.3GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.797.7GSM372983genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.597.6GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.997.1GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.997.1GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.997.1GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.995.8GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.895.7GSM372986genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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