Co-expression analysis

Gene ID HV14N24u_s_at
Gene name
Homology with ArabidopsisSimilar to At4g24590: unknown protein (HF=2e+0)
Module size 23 genes
NF 0.37
%ile 50.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.76HV14N24u_s_atHV14N24u--2e+0At4g24590unknown proteinO.I.H.G.S.X.
0.5066.90.89Contig7354_atContig7354--9e-17At4g05020NDB2 (NAD(P)H dehydrogenase B2)O.I.H.G.S.X.
0.4863.20.87Contig8606_atContig8606--3e+0At5g48545histidine triad family protein / HIT family proteinO.I.H.G.S.X.
0.4661.00.85Contig14390_atContig14390--3e-11At1g26830ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3)O.I.H.G.S.X.
0.4559.30.91HVSMEh0085G19f_atHVSMEh0085G19f--3e+0At1g75510transcription initiation factor IIF beta subunit (TFIIF-beta) family proteinO.I.H.G.S.X.
0.4356.40.81Contig5639_atContig5639--3e-12At3g22425IGPDO.I.H.G.S.X.
0.4356.40.89Contig3702_s_atContig3702--5e-3At3g06860MFP2 (MULTIFUNCTIONAL PROTEIN 2)O.I.H.G.S.X.
0.4255.20.88Contig12777_atContig12777--4e-9At1g04900unknown proteinO.I.H.G.S.X.
0.3950.50.88Contig4773_atContig4773--8e+0At5g62720integral membrane HPP family proteinO.I.H.G.S.X.
0.3849.50.89Contig20381_atContig20381--3e-4At1g22170phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.3849.50.89Contig21080_atContig21080--5e+0At5g46700TRN2 (TORNADO 2)O.I.H.G.S.X.
0.3747.90.88Contig7176_atContig7176--3e-7At5g01770RAPTOR2 (RAPTOR2)O.I.H.G.S.X.
0.3647.10.87baak1o23_s_atbaak1o23--1e+1At4g18070unknown proteinO.I.H.G.S.X.
0.3647.10.89Contig1361_atContig1361--3e-1At4g02340epoxide hydrolase, putativeO.I.H.G.S.X.
0.3342.60.91Contig4494_x_atContig4494--5e+0At5g55508unknown proteinO.I.H.G.S.X.
0.2935.50.87HV05C06u_x_atHV05C06u--1e+0At1g79910unknown proteinO.I.H.G.S.X.
0.2835.50.91Contig3906_s_atContig3906--1e-7At5g41340UBC4 (UBIQUITIN CONJUGATING ENZYME 4)O.I.H.G.S.X.
0.2732.10.87Contig1380_s_atContig1380--1e-17At1g65960GAD2 (GLUTAMATE DECARBOXYLASE 2)O.I.H.G.S.X.
0.2630.40.87Contig6745_atContig6745--3e+0At5g28950unknown proteinO.I.H.G.S.X.
0.2630.40.86Contig22417_atContig22417--3e+0At3g13040myb family transcription factorO.I.H.G.S.X.
0.2630.40.91Contig24268_atContig24268--2e+0At5g57345unknown proteinO.I.H.G.S.X.
0.2326.10.91Contig20164_atContig20164--8e+0At4g18230-O.I.H.G.S.X.
0.2122.60.83Contig15855_atContig15855--2e+0At1g48325Expressed proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.7GSM238419Endosperm 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.198.0GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
4.796.9GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.696.8GSM130803JA, biological rep1GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.995.8GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.795.5GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.394.6GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.093.8GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.893.1GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.893.1GSM372990genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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