Co-expression analysis

Gene ID HV12F18u_x_at
Gene name
Homology with ArabidopsisSimilar to At5g02500: HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) (HF=1e-8)
Module size 7 genes
NF 0.24
%ile 29.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4053.10.87HV12F18u_x_atHV12F18u--1e-8At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.6077.30.89Contig11822_atContig11822--9e+0At5g49170unknown proteinO.I.H.G.S.X.
0.4053.10.90Contig14172_atContig14172--1e-1At5g40630ubiquitin family proteinO.I.H.G.S.X.
0.3342.60.89EBro01_SQ004_B20_atEBro01_SQ004_B20--1e+0At1g25472CPuORF54 (Conserved peptide upstream open reading frame 54)O.I.H.G.S.X.
0.2935.50.89Contig23731_atContig23731--1e+0At3g55790unknown proteinO.I.H.G.S.X.
0.1514.10.87HO13O09S_s_atHO13O09S--1e+1At5g25160ZFP3 (ZINC FINGER PROTEIN 3)O.I.H.G.S.X.
0.086.50.87Contig16045_atContig16045--2e+0At3g07500far-red impaired responsive family protein / FAR1 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.799.0GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.098.7GSM311263kara_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
4.696.8GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.696.8GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.396.4GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.595.1GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.595.1GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.595.1GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM372990genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.494.8GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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