Co-expression analysis

Gene ID	HV10J10u_at
Gene name
Homology with Arabidopsis	Similar to At2g24200: cytosol aminopeptidase (HF=2e-4)
Module size	6 genes
NF	0.40
%ile	54.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.7	0.94	HV10J10u_at	HV10J10u	-	-	2e-4	At2g24200	cytosol aminopeptidase	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.94	Contig9944_s_at	Contig9944	-	-	4e+0	At2g36890	RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.94	Contig661_at	Contig661	-	-	4e-23	At2g39390	60S ribosomal protein L35 (RPL35B)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.94	Contig15041_at	Contig15041	-	-	2e+0	At3g55740	PROT2 (PROLINE TRANSPORTER 2)	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.94	Contig10432_at	Contig10432	-	-	2e-29	At3g60750	transketolase, putative	O.I.	H.G.	S.X.	Please select
0.16	15.3	0.94	Contig5401_at	Contig5401	-	-	1e-39	At1g03475	LIN2 (LESION INITIATION 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.4	99.7	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.5	96.7	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.3	96.4	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.8	95.7	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.8	95.7	GSM215728	gibberellin treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.2	94.3	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.0	93.8	GSM372973	genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.7	92.7	GSM372968	genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.6	92.3	GSM372971	genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.6	92.3	GSM372970	genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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