Co-expression analysis

Gene ID	HV08D21r_at
Gene name
Homology with Arabidopsis	Similar to At3g29305: unknown protein (HF=6e+0)
Module size	17 genes
NF	0.63
%ile	84.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.68	85.1	0.90	HV08D21r_at	HV08D21r	-	-	6e+0	At3g29305	unknown protein	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.93	Contig5976_s_at	Contig5976	-	-	4e-58	At4g39520	GTP-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.72	87.4	0.92	HV12P19u_at	HV12P19u	-	-	2e-2	At1g72600	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.69	85.5	0.92	Contig6578_at	Contig6578	-	-	1e-27	At1g64650	-	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.90	Contig21185_at	Contig21185	-	-	4e-1	At3g24710	-	O.I.	H.G.	S.X.	Please select
0.65	81.4	0.91	Contig5977_at	Contig5977	-	-	2e-21	At4g39520	GTP-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.64	80.9	0.93	Contig4999_at	Contig4999	-	-	6e-3	At3g22750	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.64	80.9	0.93	Contig590_at	Contig590	-	-	1e+0	At4g09840	unknown protein	O.I.	H.G.	S.X.	Please select
0.62	79.1	0.93	Contig4058_s_at	Contig4058	-	-	2e+0	At5g42070	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.93	HVSMEn0022J01r2_at	HVSMEn0022J01r2	-	-	6e-1	At3g29370	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.95	Contig13634_at	Contig13634	-	-	1e+0	At4g33565	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.59	75.8	0.95	HVSMEn0025K09r2_at	HVSMEn0025K09r2	-	-	8e-1	At2g21650	MEE3 (MATERNAL EFFECT EMBRYO ARREST 3)	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.94	Contig4061_at	Contig4061	-	-	2e-2	At4g17670	senescence-associated protein-related	O.I.	H.G.	S.X.	Please select
0.54	70.3	0.95	Contig5885_at	Contig5885	-	-	3e+0	At4g02465	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	68.3	0.92	HO09D01S_at	HO09D01S	-	-	2e-1	Atmg00990	-	O.I.	H.G.	S.X.	Please select
0.48	63.2	0.92	HV09L20u_s_at	HV09L20u	-	-	3e+0	At2g17340	pantothenate kinase-related	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.93	Contig9578_s_at	Contig9578	-	-	9e-13	At5g64030	dehydration-responsive protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	96.8	GSM398261	HS41-1_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.3	96.4	GSM372982	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.0	96.0	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.8	95.7	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.5	95.1	GSM372983	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.4	94.8	GSM261041	Dicktoo-deacclimation-rep3	GSE10329	Low temperature stress in cv. Dicktoo
3.4	94.8	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.3	94.6	GSM372986	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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