Co-expression analysis

Gene ID HV04B24u_at
Gene name
Homology with ArabidopsisSimilar to At5g65260: polyadenylate-binding protein family protein / PABP family protein (HF=2e+1)
Module size 6 genes
NF 0.31
%ile 40.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5572.00.90HV04B24u_atHV04B24u--2e+1At5g65260polyadenylate-binding protein family protein / PABP family proteinO.I.H.G.S.X.
0.4053.10.90Z48624_x_atZ48624--5e-4At4g39260GR-RBP8O.I.H.G.S.X.
0.3849.50.90HY04C04u_atHY04C04u--7e-1At1g09490cinnamyl-alcohol dehydrogenase family / CAD familyO.I.H.G.S.X.
0.2528.90.89S0000800150H08F1_x_atS0000800150H08F1--9e-10At5g3553040S ribosomal protein S3 (RPS3C)O.I.H.G.S.X.
0.2427.20.90HT12H07u_x_atHT12H07u--8e+0At5g64552CPuORF22 (Conserved peptide upstream open reading frame 22)O.I.H.G.S.X.
0.1716.90.90Contig6402_atContig6402--4e-1At1g65710unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.399.7GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
11.599.3GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
10.799.2GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
9.799.0GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
9.499.0GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.298.7GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.898.6GSM238419Endosperm 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.398.5GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
7.398.5GSM440976Control seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
7.198.4GSM398249Martin_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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