Co-expression analysis

Gene ID HU13P05r_at
Gene name
Homology with ArabidopsisSimilar to At3g61880: CYP78A9 (CYTOCHROME P450 78A9) (HF=1e+0)
Module size 6 genes
NF 0.14
%ile 17.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4863.20.88HU13P05r_atHU13P05r--1e+0At3g61880CYP78A9 (CYTOCHROME P450 78A9)O.I.H.G.S.X.
0.5066.90.87Contig23473_atContig23473--1e+0At3g03890FMN bindingO.I.H.G.S.X.
0.4053.10.86Contig9006_atContig9006--6e-5At1g09850XBCP3 (xylem bark cysteine peptidase 3)O.I.H.G.S.X.
0.3342.60.89HVSMEb0014K09r2_s_atHVSMEb0014K09r2--2e+0At4g21215unknown proteinO.I.H.G.S.X. (RIBOSOMAL PROTEIN S6)O.I.H.G.S.X. (TIR) domain-containing proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.299.1GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
7.198.4GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
3.394.6GSM71148OWB-R unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
3.093.8GSM419973Lemma_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
3.093.8GSM440958Control lemma_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.993.4GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.993.4GSM160815drought control rep3GSE6990Barley drought stressLink to GEO
2.893.1GSM419983Seed_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
2.893.1GSM440977Control seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.792.7GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.9806.1.S1_x_at, orthologous to the query gene, HU13P05r_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4969.7Ta.9806.1.S1_x_atAt3g61880--1e-3At2g40890CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)O.I.H.G.S.X.
0.3651.9Ta.4114.1.A1_x_atAt3g61880--2e+0At4g39360unknown proteinO.I.H.G.S.X.
0.3549.8Ta.801.2.S1_a_atAt3g61880--2e-26At5g64290DIT2.1 (DICARBOXYLATE TRANSPORT 2.1)O.I.H.G.S.X.
0.3549.8TaAffx.39319.1.A1_atAt3g61880--3e+0At5g42146unknown proteinO.I.H.G.S.X.
0.3142.7Ta.798.2.A1_a_atAt3g61880--1e-16At5g09650AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6)O.I.H.G.S.X.
0.2939.2TaAffx.111902.1.S1_atAt3g61880--2e-2At5g38060unknown proteinO.I.H.G.S.X.
0.2633.6Ta.798.2.A1_x_atAt3g61880--1e-16At5g09650AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6)O.I.H.G.S.X.
0.2329.0TaAffx.107024.1.S1_atAt3g61880--2e+1At5g11090serine-rich protein-relatedO.I.H.G.S.X.
0.1922.4Ta.9181.1.S1_atAt3g61880--2e-6At1g54580ACP2 (ACYL CARRIER PROTEIN 2)O.I.H.G.S.X.
0.1821.0Ta.9576.1.S1_atAt3g61880--7e+0At5g65080MAF5 (MADS AFFECTING FLOWERING 5)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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