Co-expression analysis

Gene ID	HU10L19u_at
Gene name
Homology with Arabidopsis	Similar to At5g60400: unknown protein (HF=4e+0)
Module size	6 genes
NF	0.06
%ile	7.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	74.9	0.91	HU10L19u_at	HU10L19u	-	-	4e+0	At5g60400	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	19.6	0.92	Contig11960_at	Contig11960	-	-	1e+0	At1g54650	methyltransferase	O.I.	H.G.	S.X.	Please select
0.07	5.8	0.92	Contig12359_at	Contig12359	-	-	8e-1	At4g12860	UNE14 (unfertilized embryo sac 14)	O.I.	H.G.	S.X.	Please select
0.05	4.1	0.91	HV_CEa0017M22f_at	HV_CEa0017M22f	-	-	1e+1	At3g54300	ATVAMP727 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 727)	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.91	Contig19021_at	Contig19021	-	-	9e-8	At1g78650	POLD3	O.I.	H.G.	S.X.	Please select
0.03	2.6	0.92	Contig18167_at	Contig18167	-	-	2e-1	At5g35945	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.7	99.4	GSM238427	Endosperm 72 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
8.0	98.7	GSM238425	Endosperm 48 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
6.9	98.3	GSM238420	Endosperm 0 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.9	98.3	GSM238421	Endosperm 0 h; Seed germination Rep 2	GSE9365	Expression data from barley maturing and germinating grains
6.2	98.0	GSM238419	Endosperm 25DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
6.1	98.0	GSM238417	Endosperm 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
5.9	97.9	GSM440978	Stressed seed_Rep1	GSE17669	Gene expression in the barley spike during drought stress
5.8	97.8	GSM238423	Endosperm 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
5.4	97.5	GSM419983	Seed_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
5.4	97.5	GSM440977	Control seed_Rep3	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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