Co-expression analysis

Gene ID	HU09E15u_x_at
Gene name
Homology with Arabidopsis	Similar to At4g37090: unknown protein (HF=1e+1)
Module size	6 genes
NF	0.77
%ile	95.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.93	HU09E15u_x_at	HU09E15u	-	-	1e+1	At4g37090	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	98.1	0.91	HU09E15u_at	HU09E15u	-	-	1e+1	At4g37090	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.94	Contig19683_at	Contig19683	-	-	1e+0	At3g24820	BSD domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.94	Contig19665_at	Contig19665	-	-	3e-1	At3g16820	F-box family protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.94	Contig26505_at	Contig26505	-	-	1e+0	At5g54300	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.93	rbags23g17_s_at	rbags23g17	-	-	3e-1	At3g46410	protein kinase family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	98.5	GSM372954	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.0	98.4	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.3	98.1	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.9	97.1	GSM372948	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.5	96.7	GSM372951	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.4	96.6	GSM261064	Xantha s-46 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.4	96.6	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.1	96.2	GSM372952	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.9	95.8	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.9	95.8	GSM261041	Dicktoo-deacclimation-rep3	GSE10329	Low temperature stress in cv. Dicktoo

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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