Co-expression analysis

Gene ID	HU02C06u_at
Gene name
Homology with Arabidopsis	Similar to At5g13650: elongation factor family protein (HF=3e-4)
Module size	7 genes
NF	0.52
%ile	73.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	77.3	0.92	HU02C06u_at	HU02C06u	-	-	3e-4	At5g13650	elongation factor family protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.94	Contig18451_at	Contig18451	-	-	5e-2	At2g05510	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.95	Contig3449_s_at	Contig3449	-	-	4e+0	At5g51812	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.94	Contig9131_s_at	Contig9131	-	-	3e+0	At5g51690	ACS12	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.95	Contig7914_at	Contig7914	-	-	2e+0	At4g27540	PRA1.H (PRENYLATED RAB ACCEPTOR 1.H)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.95	Contig8507_at	Contig8507	-	-	2e-43	At3g03120	ATARFB1C (ADP-ribosylation factor B1C)	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.96	Contig10272_at	Contig10272	-	-	8e-13	At1g22040	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	98.1	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.5	97.6	GSM261042	before 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.4	97.5	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.3	97.4	GSM261043	before 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.3	97.4	GSM261044	before 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.2	97.4	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.9	97.1	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.6	96.8	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.3	96.4	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.0	96.0	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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