Co-expression analysis

Gene ID	HU01E06w_at
Gene name
Homology with Arabidopsis	Similar to At3g24450: copper-binding family protein (HF=5e+0)
Module size	7 genes
NF	0.49
%ile	68.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	80.3	0.91	HU01E06w_at	HU01E06w	-	-	5e+0	At3g24450	copper-binding family protein	O.I.	H.G.	S.X.	Please select
0.83	94.0	0.92	HY08H18V_at	HY08H18V	-	-	5e+0	At4g24026	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.93	Contig13079_at	Contig13079	-	-	9e-12	At3g12480	NF-YC11 (NUCLEAR FACTOR Y, SUBUNIT C11)	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.93	Contig8895_at	Contig8895	-	-	7e-4	At1g19600	pfkB-type carbohydrate kinase family protein	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.93	Contig12955_at	Contig12955	-	-	6e-1	At1g74870	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.93	Contig23071_at	Contig23071	-	-	2e+0	At1g13195	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.93	Contig1189_at	Contig1189	-	-	9e+0	At4g22820	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.5	99.0	GSM440973	Stressed awn_Rep2	GSE17669	Gene expression in the barley spike during drought stress
6.5	98.2	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
5.2	97.4	GSM440974	Stressed awn_Rep3	GSE17669	Gene expression in the barley spike during drought stress
4.9	97.1	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.7	96.9	GSM238434	Embryo 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.6	96.8	GSM440961	Stressed lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
4.6	96.8	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
4.3	96.4	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.3	96.4	GSM261034	Dicktoo-chilling-rep2	GSE10329	Low temperature stress in cv. Dicktoo
4.2	96.3	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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