Co-expression analysis

Gene ID	HT12J15u_x_at
Gene name
Homology with Arabidopsis	Similar to At3g01410: RNase H domain-containing protein (HF=2e+0)
Module size	6 genes
NF	0.20
%ile	24.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.73	HT12J15u_x_at	HT12J15u	-	-	2e+0	At3g01410	RNase H domain-containing protein	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.97	Contig17523_at	Contig17523	-	-	7e-2	At4g08230	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.97	Contig17513_at	Contig17513	-	-	4e-4	At5g06600	UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.97	Contig3603_at	Contig3603	-	-	2e-15	At3g25400	-	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.97	Contig9703_at	Contig9703	-	-	3e+0	At2g37200	integral membrane protein, putative	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.92	Contig5740_at	Contig5740	-	-	7e-5	At3g10490	anac052 (Arabidopsis NAC domain containing protein 52)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.2	99.7	GSM398261	HS41-1_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.0	96.0	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.8	95.7	GSM419981	Seed_Rep1	GSE16754	Comparative transcriptional profiling of organs of the barley spike
3.8	95.7	GSM440975	Control seed_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.8	95.7	GSM431571	pathogen isolates: Polymyxa betae - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.8	95.7	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.6	95.3	GSM130803	JA, biological rep1	GSE5605	Expression data from barley under salinity stress and JA treatment
3.2	94.3	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.1	94.1	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.1	94.1	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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