Co-expression analysis

Gene ID HT07O11u_x_at
Gene name
Homology with ArabidopsisSimilar to At1g01570: fringe-related protein (HF=3e+0)
Module size 7 genes
NF 0.12
%ile 15.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.70.89HT07O11u_x_atHT07O11u--3e+0At1g01570fringe-related proteinO.I.H.G.S.X.
0.3138.60.92HT12H07u_x_atHT12H07u--8e+0At5g64552CPuORF22 (Conserved peptide upstream open reading frame 22)O.I.H.G.S.X.
0.3037.00.88HV04B24u_atHV04B24u--2e+1At5g65260polyadenylate-binding protein family protein / PABP family proteinO.I.H.G.S.X.
0.097.40.90rbaal1h20_atrbaal1h20--2e-2At5g53580aldo/keto reductase family proteinO.I.H.G.S.X.
0.086.50.89HT12E20u_s_atHT12E20u--3e+0At1g09660KH domain-containing quaking protein, putativeO.I.H.G.S.X.
0.086.50.90HS18A16u_x_atHS18A16u--5e-1At1g35467RALFL5 (RALF-LIKE 5)O.I.H.G.S.X.
0.064.80.91HB32A22r_atHB32A22r--3e+1At5g16660unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.2GSM398253Martin_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
6.398.1GSM398249Martin_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.297.4GSM398254Martin_1d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.297.4GSM398250Martin_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.696.8GSM398252Martin_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.596.7GSM398251Martin_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.396.4GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
4.396.4GSM372957genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.296.3GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.795.5GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1615872_at, orthologous to the query gene, HT07O11u_x_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7390.81615872_atAt1g01570--6e+0At5g61200-O.I.H.G.S.X.
0.4361.51621550_s_atAt1g01570--2e+0At5g39440SnRK1.3 (SNF1-RELATED PROTEIN KINASE 1.3)O.I.H.G.S.X.
0.3751.71615933_atAt1g01570hypothetical protein LOC100241901-1e+0At5g17690TFL2 (TERMINAL FLOWER 2)O.I.H.G.S.X.
0.3446.81615210_atAt1g01570hypothetical protein LOC100243622-4e-54At1g50940ETFALPHA (electron transfer flavoprotein alpha)O.I.H.G.S.X.
0.3243.11609853_atAt1g01570hypothetical protein LOC100254798-5e-75At2g18230AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)O.I.H.G.S.X.
0.3141.31617463_atAt1g01570hypothetical protein LOC100242878-2e-6At1g52670biotin/lipoyl attachment domain-containing proteinO.I.H.G.S.X.
0.2937.71617309_atAt1g01570hypothetical protein LOC100266331-6e-14At1g44170ALDH3H1 (ALDEHYDE DEHYDROGENASE 3H1)O.I.H.G.S.X.
0.2428.71619886_atAt1g01570--5e+0At5g58590RANBP1 (RAN BINDING PROTEIN 1)O.I.H.G.S.X.
0.2327.51618781_atAt1g01570hypothetical protein LOC100260972-1e+0At1g65032unknown proteinO.I.H.G.S.X.
0.2327.51620567_atAt1g01570hypothetical protein LOC100242364-3e-154At4g31990ASP5 (ASPARTATE AMINOTRANSFERASE 5)O.I.H.G.S.X.
0.2327.51608859_atAt1g01570--8e-8At5g64460-O.I.H.G.S.X.
0.2225.61614520_s_atAt1g01570hypothetical protein LOC100252479-5e+0At3g55672-O.I.H.G.S.X.
0.2225.61622624_atAt1g01570--4e-37At1g752105' nucleotidase family proteinO.I.H.G.S.X.
0.2124.01611604_atAt1g01570hypothetical protein LOC100249067-1e+0At4g21790TOM1 (TOBAMOVIRUS MULTIPLICATION 1)O.I.H.G.S.X.
0.2022.41609103_atAt1g01570--1e+0At3g16870zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.1920.91608861_atAt1g01570--2e-1At5g41530-O.I.H.G.S.X.
0.1819.41621722_atAt1g01570hypothetical protein LOC100267520-8e-43At1g53670MSRB1 (methionine sulfoxide reductase B 1)O.I.H.G.S.X.
0.1718.21614693_atAt1g01570--4e+0At3g12345unknown proteinO.I.H.G.S.X.
0.1515.61622335_s_atAt1g01570--2e-1At5g19340unknown proteinO.I.H.G.S.X.
0.1414.41606602_atAt1g01570hypothetical protein LOC100245666-4e+0At4g28050TET7 (TETRASPANIN7)O.I.H.G.S.X.
0.1414.41621050_atAt1g01570hypothetical protein LOC100263528-6e-3At3g01910SOX (SULFITE OXIDASE)O.I.H.G.S.X.
0.1111.31610450_atAt1g01570--1e+0At1g76955Expressed proteinO.I.H.G.S.X.
0.1010.31608296_atAt1g01570hypothetical protein LOC100242444-3e-127At2g43710SSI2O.I.H.G.S.X.
0.077.81607955_atAt1g01570hypothetical protein LOC100262411-4e-22At4g01900GLB1 (GLNB1 HOMOLOG)O.I.H.G.S.X.
0.056.01618321_atAt1g01570hypothetical protein LOC100260152-1e-18At1g71350eukaryotic translation initiation factor SUI1 family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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