Co-expression analysis

Gene ID HT07O11u_x_at
Gene name
Homology with ArabidopsisSimilar to At1g01570: fringe-related protein (HF=3e+0)
Module size 7 genes
NF 0.12
%ile 15.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.70.89HT07O11u_x_atHT07O11u--3e+0At1g01570fringe-related proteinO.I.H.G.S.X.
0.3138.60.92HT12H07u_x_atHT12H07u--8e+0At5g64552CPuORF22 (Conserved peptide upstream open reading frame 22)O.I.H.G.S.X.
0.3037.00.88HV04B24u_atHV04B24u--2e+1At5g65260polyadenylate-binding protein family protein / PABP family proteinO.I.H.G.S.X.
0.097.40.90rbaal1h20_atrbaal1h20--2e-2At5g53580aldo/keto reductase family proteinO.I.H.G.S.X.
0.086.50.89HT12E20u_s_atHT12E20u--3e+0At1g09660KH domain-containing quaking protein, putativeO.I.H.G.S.X.
0.086.50.90HS18A16u_x_atHS18A16u--5e-1At1g35467RALFL5 (RALF-LIKE 5)O.I.H.G.S.X.
0.064.80.91HB32A22r_atHB32A22r--3e+1At5g16660unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.2GSM398253Martin_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
6.398.1GSM398249Martin_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.297.4GSM398254Martin_1d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.297.4GSM398250Martin_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.696.8GSM398252Martin_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.596.7GSM398251Martin_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.396.4GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
4.396.4GSM372957genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.296.3GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.795.5GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os11g0538700, orthologous to the query gene, HT07O11u_x_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6787.2Os11g0538700At1g01570--1e+1At5g57785unknown proteinO.I.H.G.S.X.
0.7391.1Os06g0353101At1g01570--9e+0At2g46787unknown proteinO.I.H.G.S.X.
0.7189.6Os07g0251400At1g01570--2e+0At5g58470TAF15b (TBP-ASSOCIATED FACTOR 15b)O.I.H.G.S.X.
0.5068.0Os03g0126800At1g01570-CBL-interacting protein kinase 91e-14At5g21222protein kinase family proteinO.I.H.G.S.X.
0.4660.9Os10g0116600At1g01570-Protein kinase domain containing protein2e-2At1g07560leucine-rich repeat protein kinase, putativeO.I.H.G.S.X.
0.3032.7Os03g0825000At1g01570--2e+0At4g32870unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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