Co-expression analysis

Gene ID HT07O11u_x_at
Gene name
Homology with ArabidopsisSimilar to At1g01570: fringe-related protein (HF=3e+0)
Module size 7 genes
NF 0.12
%ile 15.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.70.89HT07O11u_x_atHT07O11u--3e+0At1g01570fringe-related proteinO.I.H.G.S.X.
0.3138.60.92HT12H07u_x_atHT12H07u--8e+0At5g64552CPuORF22 (Conserved peptide upstream open reading frame 22)O.I.H.G.S.X.
0.3037.00.88HV04B24u_atHV04B24u--2e+1At5g65260polyadenylate-binding protein family protein / PABP family proteinO.I.H.G.S.X.
0.097.40.90rbaal1h20_atrbaal1h20--2e-2At5g53580aldo/keto reductase family proteinO.I.H.G.S.X.
0.086.50.89HT12E20u_s_atHT12E20u--3e+0At1g09660KH domain-containing quaking protein, putativeO.I.H.G.S.X.
0.086.50.90HS18A16u_x_atHS18A16u--5e-1At1g35467RALFL5 (RALF-LIKE 5)O.I.H.G.S.X.
0.064.80.91HB32A22r_atHB32A22r--3e+1At5g16660unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.2GSM398253Martin_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
6.398.1GSM398249Martin_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.297.4GSM398254Martin_1d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.297.4GSM398250Martin_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.696.8GSM398252Martin_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.596.7GSM398251Martin_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.396.4GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
4.396.4GSM372957genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.296.3GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.795.5GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At1g01570, orthologous to the query gene, HT07O11u_x_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
1.00100.0At1g01570837183fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:endomembrane system;PFMOO.I.H.G.S.X.
0.3846.7At3g50050824167aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;MPFOO.I.H.G.S.X.
0.2726.2At2g32430817804galactosyltransferase family proteinF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:endomembrane system, membrane;MPOO.I.H.G.S.X.
0.2624.4At4g13990827035exostosin family proteinF:catalytic activity;P:biological_process unknown;C:cell wall, membrane;POMO.I.H.G.S.X.
0.2420.7At3g55730824739MYB109 (myb domain protein 109)putative transcription factor MYB109 (MYB109) mRNA,O.I.H.G.S.X.
0.2217.5At5g04840830363bZIP proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:unknown;PO.I.H.G.S.X.
0.2115.8At1g11940837746unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.H.G.S.X.
0.2014.4At1g08350837355endomembrane protein 70 family proteinF:SNAP receptor activity;P:membrane fusion;C:integral to membrane, phragmoplast;MPOFO.I.H.G.S.X.
0.2014.4At5g62580836379bindingF:binding;P:biological_process unknown;C:cellular_component unknown;POBMO.I.H.G.S.X.
0.2014.4At5g07730830666unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFO.I.H.G.S.X.
0.1811.4At2g20650816593zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:endomembrane system;MPOFVO.I.H.G.S.X.
0.1710.2At5g63260836446zinc finger (CCCH-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;PMFOO.I.H.G.S.X.
0.1710.2At5g53760835457MLO11 (MILDEW RESISTANCE LOCUS O 11)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).O.I.H.G.S.X.
0.168.8At4g12840826896unknown proteinF:unknown;P:unknown;C:unknown;POO.I.H.G.S.X.
0.168.8At5g56790835781protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVAO.I.H.G.S.X.
0.168.8At4g17895827513UBP20 (UBIQUITIN-SPECIFIC PROTEASE 20)Encodes a ubiquitin-specific protease.O.I.H.G.S.X.
0.157.8At3g61800825353-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBFAVO.I.H.G.S.X.
0.157.8At5g23430832409transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAVO.I.H.G.S.X.
0.157.8At2g32760817836unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOBO.I.H.G.S.X.
0.146.8At3g18230821351octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:unknown;P:unknown;C:cytosol, nucleus;MOFPBVAO.I.H.G.S.X.
0.146.8At3g10730820242sad1/unc-84-like 2 family proteinF:molecular_function unknown;P:biological_process unknown;C:nuclear envelope, endoplasmic reticulum, spindle, phragmoplast;MOBPFAO.I.H.G.S.X.
0.135.8At3g14075820623lipase class 3 family proteinF:triacylglycerol lipase activity, carboxylesterase activity;P:lipid catabolic process, lipid metabolic process;C:unknown;MOPFBVAO.I.H.G.S.X.
0.135.8At4g11800826786hydrolase/ protein serine/threonine phosphataseF:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:endoplasmic reticulum;BPOO.I.H.G.S.X.
0.124.9At1g30300839910unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPAFO.I.H.G.S.X.
0.124.9At3g10550820220phosphatase/ protein tyrosine phosphataseF:phosphatase activity, protein tyrosine phosphatase activity;P:dephosphorylation;C:cellular_component unknown;MOFPO.I.H.G.S.X.
0.124.9At3g61570825330GDAP1 (GRIP-RELATED ARF-BINDING DOMAIN-CONTAINING ARABIDOPSIS PROTEIN 1)This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC3 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (161 aa) portion of the protein.O.I.H.G.S.X.
0.124.9At1g76380843970DNA-binding bromodomain-containing proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;MFOPBVO.I.H.G.S.X.
0.124.9At5g10820830949integral membrane transporter family proteinF:transporter activity;P:transport;C:membrane;OPBMFO.I.H.G.S.X.
0.124.9At5g53890835470leucine-rich repeat transmembrane protein kinase, putativeEncodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of phytosulfokine (PSK), which is a 5-aa tyrosine-sulfated peptide that primarily promotes cellular proliferation.O.I.H.G.S.X.
0.124.9At2g46700819282calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:unknown;MOPFBVAO.I.H.G.S.X.
0.114.1At5g51710835245KEA5member of Putative potassium proton antiporter familyO.I.H.G.S.X.
0.114.1At1g68920843225basic helix-loop-helix (bHLH) family proteinF:transcription factor activity;P:regulation of transcription;C:nucleus;PMOBFVAO.I.H.G.S.X.
0.114.1At4g21060827853galactosyltransferase family proteinF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:membrane;MPOFBO.I.H.G.S.X.
0.114.1At2g19950816514GC1 (Golgin Candidate 1)This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC1 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (558-715 aa) portion of the protein.O.I.H.G.S.X.
0.114.1At3g51640824327unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOFBPVAO.I.H.G.S.X.
0.114.1At3g59470825116far-red impaired responsive family protein / FAR1 family proteinF:unknown;P:response to red or far red light;C:unknown;PO.I.H.G.S.X.
0.103.4At4g11970826804YT521-B-like family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOO.I.H.G.S.X.
0.103.4At1g23330838942unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOPFMO.I.H.G.S.X.
0.103.4At1g57700842146protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOFBVAO.I.H.G.S.X.
0.103.4At5g55310835624TOP1BETA (DNA TOPOISOMERASE 1 BETA)Encodes one of two Arabidopsis type-I DNA topoisomerase I genes. Reducing the level of expression of this gene in a top1alpha (At5g55300) mutant background causes seedling lethality.O.I.H.G.S.X.
0.103.4At2g36960818270TKI1 (TSL-kinase interacting protein 1)Arabidopsis thaliana myb/SANT domain proteinO.I.H.G.S.X.
0.103.4At5g65290836654LMBR1 integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, integral to membrane;MOFPO.I.H.G.S.X.
0.103.4At1g77220844058unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;MPFOO.I.H.G.S.X.
0.103.4At5g20680832191unknown proteinF:unknown;P:biological_process unknown;C:unknown;POMFVBO.I.H.G.S.X.
0.103.4At2g27350817278OTU-like cysteine protease family proteinF:cysteine-type peptidase activity;P:biological_process unknown;C:chloroplast;OMPFBVO.I.H.G.S.X.
0.092.8At3g03690821186UNE7 (unfertilized embryo sac 7)F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process, double fertilization forming a zygote and endosperm, pollen tube development;C:endomembrane system, membrane;MPBVOO.I.H.G.S.X.
0.092.8At1g20670838655DNA-binding bromodomain-containing proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;OMFPBVO.I.H.G.S.X.
0.092.8At5g42350834241kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBO.I.H.G.S.X.
0.092.8At5g10270830891CDKCEncodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development.O.I.H.G.S.X.
0.092.8At1g79820844321SGB1 (SUPPRESSOR OF G PROTEIN BETA1)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAVO.I.H.G.S.X.
0.092.8At4g24470828549TIFY1ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.O.I.H.G.S.X.
0.092.8At3g53880824555aldo/keto reductase family proteinF:oxidoreductase activity;P:response to cadmium ion;C:unknown;BOMFPAO.I.H.G.S.X.
0.082.3At5g22220832283--O.I.H.G.S.X.
0.082.3At1g63490842655transcription factor jumonji (jmjC) domain-containing proteinF:transcription factor activity;P:unknown;C:nucleus;MFOPBO.I.H.G.S.X.
0.082.3At4g14920827150DNA binding / protein binding / zinc ion bindingF:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPFOO.I.H.G.S.X.
0.082.3At2g25300817068transferase, transferring glycosyl groups / transferase, transferring hexosyl groupsF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:membrane;PMOO.I.H.G.S.X.
0.082.3At5g51050835178mitochondrial substrate carrier family proteinF:binding, calcium ion binding;P:transport;C:mitochondrial inner membrane, membrane;MFPOBVO.I.H.G.S.X.
0.071.9At1g72310843563ATL3Encodes a putative RING-H2 zinc finger protein ATL3 (ATL3).O.I.H.G.S.X.
0.071.9At3g51250824288senescence/dehydration-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBO.I.H.G.S.X.
0.071.9At5g13480831191FYEncodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.O.I.H.G.S.X.
0.071.9At4g32010829332HSL1 (HSI2-LIKE 1)F:transcription factor activity;P:seed maturation, positive regulation of seed germination, regulation of transcription;C:unknown;PMOO.I.H.G.S.X.
0.071.9At4g25680828673unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFO.I.H.G.S.X.
0.061.4At2g434208189433-beta hydroxysteroid dehydrogenase/isomerase family proteinF:binding, 3-beta-hydroxy-delta5-steroid dehydrogenase activity, catalytic activity;P:steroid biosynthetic process, metabolic process;C:plasma membrane;BOMPAFVO.I.H.G.S.X.
0.061.4At1g73970843735unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.H.G.S.X.
0.051.1At3g51390824302zinc finger (DHHC type) family proteinF:zinc ion binding;P:biological_process unknown;C:plasma membrane;MOFPO.I.H.G.S.X.
0.051.1At5g53340835415galactosyltransferase family proteinF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:membrane;PMOO.I.H.G.S.X.
0.051.1At1g59560842247ZCF61F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOVFBO.I.H.G.S.X.
0.051.1At1g16020838172unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.H.G.S.X.
0.051.1At1g16570838227glycosyl transferase family 1 proteinF:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:mitochondrion;BMOFPAO.I.H.G.S.X.
0.051.1At5g04510830330PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1)Encodes 3-phosphoinositide-dependent protein kinase that contains pleckstrin homology domain and binds 3-phosphoinositides. It activates the protein kinase AGC2-1 in a phosphatidic acid dependent manner. Phosphorylates S6K1. Interacts with PID, and transphosphorylation by PDK1 increases PID autophosphorylation.O.I.H.G.S.X.
0.051.1At3g10600820229CAT7 (CATIONIC AMINO ACID TRANSPORTER 7)Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.O.I.H.G.S.X.
0.040.9At4g32620829397nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;OPMFBO.I.H.G.S.X.
0.040.9At2g19600816479ATKEA4member of Putative potassium proton antiporter familyO.I.H.G.S.X.
0.040.9At4g32180829351ATPANK2 (PANTOTHENATE KINASE 2)Encodes a protein with pantothenate kinase activity.O.I.H.G.S.X.
0.030.6At3g58460825015ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15)F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BOPMFAVO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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