Co-expression analysis

Gene ID HT02B15r_at
Gene name
Homology with ArabidopsisSimilar to At1g05040: unknown protein (HF=2e-2)
Module size 9 genes
NF 0.26
%ile 33.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8494.30.79HT02B15r_atHT02B15r--2e-2At1g05040unknown proteinO.I.H.G.S.X.
0.5066.90.84Contig19645_atContig19645--5e-1At4g19610RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.4661.00.84HF06A04r_atHF06A04r--3e-1At2g26680-O.I.H.G.S.X.
0.3647.10.86U43494_atU43494--3e+0At3g53490unknown proteinO.I.H.G.S.X.
0.2528.90.83Contig13823_atContig13823--2e-4At5g13170SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29)O.I.H.G.S.X.
0.1919.60.80Contig25981_atContig25981--9e-8At1g64350SEH1HO.I.H.G.S.X.
0.1514.10.83HO04L23S_atHO04L23S--1e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.
0.1412.90.86Contig12526_atContig12526--9e-1At5g23280TCP family transcription factor, putativeO.I.H.G.S.X.
0.119.40.82Contig1204_s_atContig1204cytosolic heat shock protein 90-0At5g56010HSP81-3O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.899.8GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
13.399.4GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
6.698.2GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
5.097.2GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.396.4GSM419979Awn_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
4.396.4GSM440970Control awn_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.296.3GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
3.595.1GSM419973Lemma_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
3.595.1GSM440958Control lemma_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.194.1GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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