Co-expression analysis

Gene ID HS17P17u_at
Gene name
Homology with ArabidopsisSimilar to At2g12405: unknown protein (HF=2e-1)
Module size 6 genes
NF 0.38
%ile 51.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.50.95HS17P17u_atHS17P17u--2e-1At2g12405unknown proteinO.I.H.G.S.X.
0.4661.00.95Contig10681_atContig10681--1e-1At3g19480D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putativeO.I.H.G.S.X.
0.4458.90.96EBro08_SQ004_P19_atEBro08_SQ004_P19--4e+0At2g40170GEA6 (LATE EMBRYOGENESIS ABUNDANT 6)O.I.H.G.S.X.
0.2935.50.95HA27P15r_atHA27P15r--2e+1At5g10990auxin-responsive family proteinO.I.H.G.S.X.
0.2427.20.95HS09A23u_x_atHS09A23u--3e+0At5g20165unknown proteinO.I.H.G.S.X.
0.2021.10.95Contig23296_atContig23296--1e-17At1g02190CER1 protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.198.7GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.498.1GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
6.198.0GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.997.1GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.596.7GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.296.3GSM372950genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.695.3GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
3.394.6GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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