Co-expression analysis

Gene ID	HS17M12u_s_at
Gene name
Homology with Arabidopsis	Similar to At3g23250: MYB15 (MYB DOMAIN PROTEIN 15) (HF=4e+0)
Module size	6 genes
NF	0.48
%ile	67.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	58.9	0.96	HS17M12u_s_at	HS17M12u	-	-	4e+0	At3g23250	MYB15 (MYB DOMAIN PROTEIN 15)	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.96	Contig10592_at	Contig10592	-	-	1e-2	At5g26180	NOL1/NOP2/sun family protein	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.96	Contig12784_at	Contig12784	-	-	2e-10	At1g28520	VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN)	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.97	Contig11977_at	Contig11977	-	-	6e-1	At5g62490	ATHVA22B	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.96	Contig9449_s_at	Contig9449	-	-	3e-18	At2g27350	OTU-like cysteine protease family protein	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.96	Contig9752_at	Contig9752	-	-	3e+0	At2g11651	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.7	99.7	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
14.0	99.5	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
8.8	98.9	GSM282030	Malting_day4_Harrington_rep2	GSE11200	Expression data from malting barley seeds
6.0	97.9	GSM282033	Malting_day4_Harrington_rep4	GSE11200	Expression data from malting barley seeds
3.7	95.5	GSM238431	Embryo 25DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.7	95.5	GSM238430	Embryo 25DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.4	94.8	GSM130800	control, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
3.3	94.6	GSM161200	cold treatment rep1	GSE6993	Barley low temperature stress
3.2	94.3	GSM130806	JA and salinity stress, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
3.1	94.1	GSM130804	JA, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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