Co-expression analysis

Gene ID HS09L05u_at
Gene name
Homology with ArabidopsisSimilar to At5g45350: proline-rich family protein (HF=4e+0)
Module size 6 genes
NF 0.28
%ile 36.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.70.91HS09L05u_atHS09L05u--4e+0At5g45350proline-rich family proteinO.I.H.G.S.X.
0.4458.90.92Contig19672_atContig19672--5e-7At3g09980unknown proteinO.I.H.G.S.X.
0.4458.90.94Contig4608_atContig4608--3e-9At1g12840DET3 (DE-ETIOLATED 3)O.I.H.G.S.X.
0.2326.10.94Contig20086_s_atContig20086--1e+0At5g57570-O.I.H.G.S.X.
0.2021.10.94Contig9680_atContig9680--6e-2At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)O.I.H.G.S.X.
0.108.40.92Contig2433_s_atContig2433--9e-9At4g29260acid phosphatase class B family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.899.1GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.298.7GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.098.7GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.898.3GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.298.0GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
5.997.9GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.297.4GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
4.796.9GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.696.8GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.296.3GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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