Co-expression analysis

Gene ID HS09F06u_at
Gene name
Homology with ArabidopsisSimilar to At3g50330: HEC2 (HECATE 2) (HF=3e-4)
Module size 6 genes
NF 0.55
%ile 75.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.82HS09F06u_atHS09F06u--3e-4At3g50330HEC2 (HECATE 2)O.I.H.G.S.X.
0.7388.70.85Contig443_atContig443--2e-8At4g27230HTA2 (histone H2A)O.I.H.G.S.X.
0.7388.70.85Contig4439_atContig4439--2e-10At2g33800ribosomal protein S5 family proteinO.I.H.G.S.X.
0.6784.70.86Contig2006_s_atContig2006--4e-26At3g46230ATHSP17.4O.I.H.G.S.X.
0.5066.90.86Contig18615_atContig18615--2e+0At1g55520TBP2 (TATA BINDING PROTEIN 2)O.I.H.G.S.X.
0.2021.10.84Contig17340_atContig17340--7e-9At3g06630protein kinase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.099.9GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
27.099.8GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
25.999.8GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
22.099.8GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
18.199.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
8.098.7GSM398264HS41-1_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
6.097.9GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.697.7GSM398268HS41-1_3d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.397.4GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
5.397.4GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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