Co-expression analysis

Gene ID	HR01N23u_at
Gene name
Homology with Arabidopsis	Similar to At1g02360: chitinase, putative (HF=3e+0)
Module size	6 genes
NF	0.71
%ile	92.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.93	HR01N23u_at	HR01N23u	-	-	3e+0	At1g02360	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.92	Contig18950_at	Contig18950	-	-	1e+0	At3g27520	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.91	HVSMEh0087C02r2_s_at	HVSMEh0087C02r2	-	-	4e+0	At1g32585	VQ motif-containing protein-related	O.I.	H.G.	S.X.	Please select
0.63	80.3	0.90	Contig12866_at	Contig12866	-	-	1e-5	At3g49960	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.92	Contig12672_at	Contig12672	-	-	2e-1	At3g23930	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.90	EBro08_SQ007_P13_at	EBro08_SQ007_P13	-	-	4e+0	At2g22060	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.2	99.0	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.9	98.9	GSM238427	Endosperm 72 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
8.2	98.7	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
6.0	97.9	GSM238420	Endosperm 0 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.8	97.8	GSM431570	pathogen isolates: Mock inoculated control - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.4	97.5	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
4.4	96.6	GSM431551	pathogen isolates: Polymyxa graminis - rep3	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
4.1	96.2	GSM282037	Malting_day1_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.9	95.8	GSM238426	Endosperm 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.7	95.5	GSM146363	Maythorpe Root Control, biological rep1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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