Co-expression analysis

Gene ID HR01G08u_at
Gene name
Homology with ArabidopsisSimilar to At5g03010: kelch repeat-containing protein (HF=1e+1)
Module size 10 genes
NF 0.55
%ile 76.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.30.89HR01G08u_atHR01G08u--1e+1At5g03010kelch repeat-containing proteinO.I.H.G.S.X.
0.7388.70.89Contig23913_atContig23913--4e-1At1g06980unknown proteinO.I.H.G.S.X.
0.5774.90.89Contig11158_atContig11158--6e-48At2g30740serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.5674.30.90HR01N23u_atHR01N23u--3e+0At1g02360chitinase, putativeO.I.H.G.S.X.
0.5572.00.88HVSMEi0003I03r2_x_atHVSMEi0003I03r2--6e+0At5g48220indole-3-glycerol phosphate synthase, putativeO.I.H.G.S.X.
0.5572.00.90Contig20673_atContig20673--2e+0At5g63580FLS2 (FLAVONOL SYNTHASE 2)O.I.H.G.S.X.
0.5066.90.91EBro08_SQ007_P13_atEBro08_SQ007_P13--4e+0At2g22060-O.I.H.G.S.X.
0.4458.90.90Contig24112_atContig24112--1e+0At4g29340PRF4 (PROFILIN 4)O.I.H.G.S.X.
0.4458.90.89Contig18950_atContig18950--1e+0At3g27520unknown proteinO.I.H.G.S.X.
0.3849.50.93Contig15497_atContig15497--7e+0At5g62576unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.599.5GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
12.999.4GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
9.599.0GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
9.198.9GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
7.298.5GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
5.997.9GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.897.8GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.797.7GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.497.5GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.796.9GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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