Co-expression analysis

Gene ID HP01O07w_at
Gene name
Homology with ArabidopsisSimilar to At5g16490: RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4) (HF=3e+0)
Module size 7 genes
NF 0.65
%ile 86.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5572.00.92HP01O07w_atHP01O07w--3e+0At5g16490RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4)O.I.H.G.S.X.
0.7790.80.94Contig20065_atContig20065--4e-1At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)O.I.H.G.S.X.
0.7589.50.94Contig3565_s_atContig3565--2e-1At4g01430nodulin MtN21 family proteinO.I.H.G.S.X.
0.7388.70.94Contig18430_atContig18430--2e-2At1g18340basal transcription factor complex subunit-relatedO.I.H.G.S.X.
0.5674.30.92Mla12DH_orf_3pri12_atMla12DH_orf_3pri12--6e-1At4g2362050S ribosomal protein-relatedO.I.H.G.S.X.
0.5369.70.94Contig13565_atContig13565--9e+0At4g29770-O.I.H.G.S.X.
0.5066.90.94HO11K23S_s_atHO11K23S--4e+0At3g17420GPK1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.498.5GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.397.4GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.997.1GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.796.9GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.595.1GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.294.3GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.194.1GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
3.093.8GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.093.8GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
3.093.8GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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