Co-expression analysis

Gene ID	HO10P07S_at
Gene name
Homology with Arabidopsis	Similar to At2g16505: - (HF=3e-2)
Module size	6 genes
NF	0.42
%ile	58.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	77.3	0.94	HO10P07S_at	HO10P07S	-	-	3e-2	At2g16505	-	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.94	Contig13690_at	Contig13690	-	-	3e-2	At5g28610	-	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.95	rbaal20i06_s_at	rbaal20i06	-	-	8e-3	At1g17650	GLYR2 (GLYOXYLATE REDUCTASE 2)	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.95	Contig9135_at	Contig9135	-	-	1e-42	At4g11820	MVA1	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.94	Contig11633_at	Contig11633	-	-	6e-1	At3g53650	histone H2B, putative	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.95	Contig11024_at	Contig11024	-	-	3e-10	At1g32550	ferredoxin family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	98.1	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.9	97.1	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
4.8	97.0	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.2	96.3	GSM440972	Stressed awn_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.5	95.1	GSM146379	Maythorpe shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.5	95.1	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.3	94.6	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.2	94.3	GSM213441	Barley seeds control in Hoagland solution for 12hr	GSE8618	P. aeruginosa virulent factor to barley
3.1	94.1	GSM146373	Golden Promise shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.1	94.1	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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