Co-expression analysis

Gene ID HO10P07S_at
Gene name
Homology with ArabidopsisSimilar to At2g16505: - (HF=3e-2)
Module size 6 genes
NF 0.42
%ile 58.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.30.94HO10P07S_atHO10P07S--3e-2At2g16505-O.I.H.G.S.X.
0.6784.70.94Contig13690_atContig13690--3e-2At5g28610-O.I.H.G.S.X.
0.5369.70.95rbaal20i06_s_atrbaal20i06--8e-3At1g17650GLYR2 (GLYOXYLATE REDUCTASE 2)O.I.H.G.S.X.
0.5066.90.95Contig9135_atContig9135--1e-42At4g11820MVA1O.I.H.G.S.X.
0.2935.50.94Contig11633_atContig11633--6e-1At3g53650histone H2B, putativeO.I.H.G.S.X.
0.2224.20.95Contig11024_atContig11024--3e-10At1g32550ferredoxin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.498.1GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.997.1GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.897.0GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.296.3GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.595.1GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.595.1GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.394.6GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.194.1GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.194.1GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage