Co-expression analysis

Gene ID HM11P04r_at
Gene name
Homology with ArabidopsisSimilar to At2g31600: unknown protein (HF=3e+0)
Module size 32 genes
NF 0.89
%ile 99.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9095.70.82HM11P04r_atHM11P04r--3e+0At2g31600unknown proteinO.I.H.G.S.X.
0.9599.20.89Contig21830_atContig21830--1e+0At3g17660AGD15 (ARF-GAP domain 15)O.I.H.G.S.X.
0.9498.90.88Contig1675_s_atContig1675--7e+0Atmg01090-O.I.H.G.S.X.
0.9498.90.88HB04I10r_atHB04I10r--5e+0At5g56230PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)O.I.H.G.S.X.
0.9298.40.86HD06J14r_atHD06J14r--3e+1At5g38790unknown proteinO.I.H.G.S.X.
0.9298.40.87HM05O11r_atHM05O11r--5e-1At2g17540unknown proteinO.I.H.G.S.X.
0.9298.40.88Contig25644_atContig25644--4e+0At4g19003VPS25O.I.H.G.S.X.
0.9298.40.87HF14A04r_atHF14A04r--2e+0At5g22240OFP10O.I.H.G.S.X.
0.9298.40.89HZ01M13u_atHZ01M13u--4e+0At3g25730AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.9298.40.85HD02I19r_atHD02I19r--7e+0At5g46490disease resistance protein (TIR-NBS class), putativeO.I.H.G.S.X.
0.9298.40.86Contig2522_atContig2522--1e-93At1g07770RPS15A (ribosomal protein s15a)O.I.H.G.S.X.
0.9198.10.87Contig11232_atContig11232--1e-4At3g26790FUS3 (FUSCA 3)O.I.H.G.S.X.
0.9095.70.84Contig20692_atContig20692--7e+0At5g57060unknown proteinO.I.H.G.S.X.
0.9095.70.84EBma08_SQ002_F06_atEBma08_SQ002_F06--9e-1At3g43170unknown proteinO.I.H.G.S.X.
0.8995.40.85EBem07_SQ004_I01_atEBem07_SQ004_I01--4e+0At2g31335unknown proteinO.I.H.G.S.X.
0.8995.40.87EBma03_SQ002_D19_atEBma03_SQ002_D19--1e+0At5g57391unknown proteinO.I.H.G.S.X.
0.8895.20.83HB14P07r_atHB14P07r--6e+0At5g17810WOX12 (WUSCHEL related homeobox 12)O.I.H.G.S.X.
0.8895.20.86HB25F09r_x_atHB25F09r--6e+0At4g36515unknown proteinO.I.H.G.S.X.
0.8895.20.86HD04G09u_atHD04G09u--1e+0At2g46690auxin-responsive family proteinO.I.H.G.S.X.
0.8895.20.87Contig23510_atContig23510--2e+0At1g03260-O.I.H.G.S.X.
0.8895.20.86Contig24884_atContig24884--1e-1At5g10140FLC (FLOWERING LOCUS C)O.I.H.G.S.X.
0.8795.00.84HD08L09r_atHD08L09r--4e+0At2g40085unknown proteinO.I.H.G.S.X.
0.8795.00.85Contig12012_atContig12012--1e+0At1g31040unknown proteinO.I.H.G.S.X.
0.8795.00.85HB11D23r_x_atHB11D23r--2e+0At2g14110-O.I.H.G.S.X.
0.8795.00.85HM11M18r_atHM11M18r--9e-1At2g27160unknown proteinO.I.H.G.S.X.
0.8795.00.85HF09N12r_atHF09N12r--1e-1At5g39330unknown proteinO.I.H.G.S.X.
0.8795.00.86HB04I10r_x_atHB04I10r--5e+0At5g56230PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)O.I.H.G.S.X.
0.8795.00.82HF13L09r_atHF13L09r--3e+0At4g10430-O.I.H.G.S.X.
0.8795.00.87Contig204_s_atContig204--5e-43At1g09200histone H3O.I.H.G.S.X.
0.7790.80.82HB01M09r_atHB01M09r--3e-1At3g22070proline-rich family proteinO.I.H.G.S.X.
0.7489.10.85HF13N11r_x_atHF13N11r--2e+0At5g10260AtRABH1e (Arabidopsis Rab GTPase homolog H1e)O.I.H.G.S.X.
0.7086.00.85Contig17965_atContig17965--2e-17At3g15352ATCOX17O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.9GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
8.398.8GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
7.598.6GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.798.3GSM261053Bonus Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.298.0GSM261054Bonus Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.197.3GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.997.1GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.596.7GSM238423Endosperm 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.596.7GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.596.7GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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