Co-expression analysis

Gene ID HM02O12u_at
Gene name
Homology with ArabidopsisSimilar to At4g30280: XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18) (HF=6e-1)
Module size 24 genes
NF 0.98
%ile 99.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.40.98HM02O12u_atHM02O12u--6e-1At4g30280XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18)O.I.H.G.S.X.
0.98100.00.98Contig23305_atContig23305--1e-1At4g28890protein binding / ubiquitin-protein ligase/ zinc ion bindingO.I.H.G.S.X.
0.98100.00.98HM09B02r_x_atHM09B02r--4e+0At3g01960unknown proteinO.I.H.G.S.X.
0.98100.00.99HM03E04u_atHM03E04u--1e+1At5g35640-O.I.H.G.S.X.
0.98100.00.99HM09B02r_s_atHM09B02r--4e+0At3g01960unknown proteinO.I.H.G.S.X.
0.98100.00.99Contig6485_atContig6485--3e-1At5g24630BIN4 (brassinosteroid-insensitive4)O.I.H.G.S.X.
0.98100.00.99Contig6486_atContig6486--8e-23At4g30780unknown proteinO.I.H.G.S.X.
0.98100.00.99Contig6531_s_atContig6531--6e-1At5g01070zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.98100.00.99Contig12396_atContig12396--2e+0At3g06280-O.I.H.G.S.X.
0.98100.00.99Contig18049_atContig18049--5e-4At4g21065-O.I.H.G.S.X.
0.98100.00.99Contig19370_atContig19370--3e+0At5g05610AL1 (ALFIN-LIKE 1)O.I.H.G.S.X.
0.98100.00.99Contig17393_atContig17393--5e-3At1g22200unknown proteinO.I.H.G.S.X.
0.98100.00.99Contig18578_atContig18578--2e+0At1g51720glutamate dehydrogenase, putativeO.I.H.G.S.X.
0.98100.00.99Contig13999_atContig13999--2e+0At1g29390COR314-TM2O.I.H.G.S.X.
0.9699.40.98Contig1132_s_atContig1132--2e-14At1g07790HTB1O.I.H.G.S.X.
0.9699.40.98Contig6500_atContig6500--2e+0At4g09180basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.9498.90.98Contig20810_atContig20810--1e+0At5g06070RBE (RABBIT EARS)O.I.H.G.S.X.
0.9498.90.98Contig23137_atContig23137--2e-1At4g35070-O.I.H.G.S.X.
0.9498.90.98HM10P19r_atHM10P19r--1e+0At4g03298unknown proteinO.I.H.G.S.X.
0.9498.90.98Contig13543_atContig13543--3e+0At4g23520cysteine proteinase, putativeO.I.H.G.S.X.
0.9298.40.97Contig21529_atContig21529--7e+0At3g44350anac061 (Arabidopsis NAC domain containing protein 61)O.I.H.G.S.X.
0.9198.10.99HM01N03w_atHM01N03w--4e+0At4g26410-O.I.H.G.S.X.
0.8995.40.99Contig2384_atContig2384--2e-1At5g25570unknown proteinO.I.H.G.S.X.
0.8995.40.97Contig25177_atContig25177--2e-20At1g29930CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.999.4GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
12.799.4GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
11.699.3GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
8.198.7GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.698.2GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.497.5GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.097.2GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.097.2GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.496.6GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
4.396.4GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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